Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AL591742.1-201ENST00000604433 565 ntBASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 CDCA4P2-201ENST00000441182 718 ntBASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK4Q9HAZ1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.64■□□□□ 0.74
CLK4Q9HAZ1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLK4Q9HAZ1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLK4Q9HAZ1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 CNN2P6-201ENST00000439038 900 ntBASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 RAP2CP1-201ENST00000605103 478 ntBASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLK4Q9HAZ1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 AC091799.1-201ENST00000422823 811 ntBASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 CDV3P1-201ENST00000471403 739 ntBASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK4Q9HAZ1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK4Q9HAZ1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms