Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 AC073314.1-201ENST00000568729 2216 ntBASIC21.55■■□□□ 1.04
SYNCQ9H7C4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 CDCA4P2-201ENST00000441182 718 ntBASIC21.55■■□□□ 1.04
SYNCQ9H7C4 AC026185.1-201ENST00000445748 174 ntBASIC21.55■■□□□ 1.04
SYNCQ9H7C4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 LINC01006-201ENST00000333319 2292 ntBASIC21.55■■□□□ 1.04
SYNCQ9H7C4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.55■■□□□ 1.04
SYNCQ9H7C4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNCQ9H7C4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 CYP21A1P-202ENST00000354927 1481 ntBASIC21.53■■□□□ 1.04
SYNCQ9H7C4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 OR10C1-204ENST00000622521 1039 ntBASIC21.53■■□□□ 1.04
SYNCQ9H7C4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 AC092667.1-201ENST00000434301 2586 ntBASIC21.53■■□□□ 1.04
SYNCQ9H7C4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYNCQ9H7C4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 AP005212.1-201ENST00000581547 1997 ntBASIC21.52■■□□□ 1.04
SYNCQ9H7C4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 MIR663A-201ENST00000385250 93 ntBASIC21.52■■□□□ 1.04
SYNCQ9H7C4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 AC092720.2-201ENST00000602388 1665 ntBASIC21.52■■□□□ 1.04
SYNCQ9H7C4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 AC087633.2-202ENST00000565166 1439 ntBASIC21.52■■□□□ 1.04
SYNCQ9H7C4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNCQ9H7C4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SYNCQ9H7C4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SYNCQ9H7C4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
SYNCQ9H7C4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 MCRIP2P1-201ENST00000394346 511 ntBASIC21.51■■□□□ 1.03
SYNCQ9H7C4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNCQ9H7C4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNCQ9H7C4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms