Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 AC136469.2-201ENST00000623944 1028 ntBASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 BX119927.1-201ENST00000636596 1552 ntBASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.11■■□□□ 1.13
KCNF1Q9H3M0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 AP004607.4-201ENST00000530158 1459 ntBASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 AC133561.4-201ENST00000566112 224 ntBASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.1■■□□□ 1.13
KCNF1Q9H3M0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.09■■□□□ 1.13
KCNF1Q9H3M0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 AL138781.2-201ENST00000617896 1843 ntBASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 SRD5A1P1-201ENST00000442297 786 ntBASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 AC092171.4-201ENST00000609130 632 ntBASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
KCNF1Q9H3M0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.12
KCNF1Q9H3M0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KCNF1Q9H3M0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KCNF1Q9H3M0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.08■■□□□ 1.12
KCNF1Q9H3M0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.08■■□□□ 1.12
KCNF1Q9H3M0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
KCNF1Q9H3M0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 AC005224.4-201ENST00000583262 1652 ntBASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 AL138724.1-201ENST00000606771 1088 ntBASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNF1Q9H3M0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms