Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCX3BQ9H321 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VCX3BQ9H321 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VCX3BQ9H321 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
VCX3BQ9H321 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VCX3BQ9H321 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VCX3BQ9H321 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCX3BQ9H321 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCX3BQ9H321 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VCX3BQ9H321 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.27■□□□□ 0.68
VCX3BQ9H321 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.27■□□□□ 0.68
VCX3BQ9H321 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.27■□□□□ 0.68
VCX3BQ9H321 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.27■□□□□ 0.68
VCX3BQ9H321 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCX3BQ9H321 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCX3BQ9H321 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCX3BQ9H321 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCX3BQ9H321 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCX3BQ9H321 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCX3BQ9H321 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCX3BQ9H321 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
VCX3BQ9H321 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCX3BQ9H321 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.26■□□□□ 0.67
VCX3BQ9H321 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.25■□□□□ 0.67
VCX3BQ9H321 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.25■□□□□ 0.67
VCX3BQ9H321 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VCX3BQ9H321 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.25■□□□□ 0.67
VCX3BQ9H321 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms