Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 MIR2861-201ENST00000636310 90 ntBASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 AC116050.2-201ENST00000612102 1779 ntBASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD4Q9H0A8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD4Q9H0A8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 AC138907.5-202ENST00000569484 235 ntBASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 AL136967.2-201ENST00000623968 743 ntBASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD4Q9H0A8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD4Q9H0A8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 AL139246.5-201ENST00000606645 996 ntBASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 AL358852.1-201ENST00000623174 1268 ntBASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD4Q9H0A8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 SMG8-203ENST00000578922 2178 ntBASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms