Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM2Q9C040 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 AC010536.3-201ENST00000620306 533 ntBASIC18.62■□□□□ 0.57
TRIM2Q9C040 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 KRT8P36-201ENST00000489121 1440 ntBASIC18.62■□□□□ 0.57
TRIM2Q9C040 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM2Q9C040 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM2Q9C040 AIRN-201ENST00000601203 4374 ntBASIC18.62■□□□□ 0.57
TRIM2Q9C040 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 AL591742.1-201ENST00000604433 565 ntBASIC18.61■□□□□ 0.57
TRIM2Q9C040 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM2Q9C040 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM2Q9C040 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 PGM5P4-201ENST00000421970 445 ntBASIC18.6■□□□□ 0.57
TRIM2Q9C040 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM2Q9C040 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM2Q9C040 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.59■□□□□ 0.57
TRIM2Q9C040 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 AC080038.1-201ENST00000611274 1154 ntBASIC18.59■□□□□ 0.57
TRIM2Q9C040 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM2Q9C040 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM2Q9C040 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM2Q9C040 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM2Q9C040 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM2Q9C040 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM2Q9C040 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM2Q9C040 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM2Q9C040 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms