Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC012506.2-201ENST00000426527 533 ntTSL 4 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 ARHGEF19-AS1-201ENST00000457809 439 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 THAP6-211ENST00000507885 896 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC011726.1-201ENST00000515686 669 ntBASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC027216.1-201ENST00000577726 685 ntBASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 CAHM-201ENST00000604200 896 ntBASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AC007497.1-201ENST00000610421 561 ntBASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 AL353608.4-201ENST00000624487 1188 ntBASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 SOX2-OT-244ENST00000627738 692 ntTSL 5 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
KRTAP3-3Q9BYR6 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 HLA-A-201ENST00000376802 1334 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 RPL12P2-201ENST00000424565 493 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 MTND1P10-201ENST00000426108 832 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC097523.2-201ENST00000435551 652 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC004854.1-201ENST00000440356 349 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 HSFY3P-201ENST00000444242 1191 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC007036.3-201ENST00000511893 614 ntTSL 3 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 RNU4-89P-201ENST00000607443 133 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC009032.1-201ENST00000617574 431 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC098679.5-201ENST00000624394 571 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AL513327.1-204ENST00000630229 870 ntTSL 5 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AL590396.4-201ENST00000636779 956 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC013268.1-206ENST00000638368 961 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AC112229.1-201ENST00000639295 961 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 LINC02211-202ENST00000641091 839 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AL449106.1-201ENST00000608517 1980 ntBASIC12.47□□□□□ -0.41
KRTAP3-3Q9BYR6 AP002414.2-202ENST00000590929 1450 ntBASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC078878.1-201ENST00000539832 958 ntBASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC090888.3-201ENST00000558917 509 ntBASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 PCNAP1-202ENST00000595299 752 ntBASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC078795.2-201ENST00000602835 1252 ntBASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC114810.1-201ENST00000607415 473 ntBASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AC097534.2-204ENST00000608892 284 ntTSL 2 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-3Q9BYR6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
KRTAP3-3Q9BYR6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KRTAP3-3Q9BYR6 TPTE2P2-201ENST00000403471 1466 ntBASIC12.46□□□□□ -0.42
KRTAP3-3Q9BYR6 AL512310.2-201ENST00000547175 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC02297-201ENST00000548050 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
KRTAP3-3Q9BYR6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms