Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 MTND2P31-201ENST00000512602 616 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 Y_RNA.655-201ENST00000515919 96 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 NPM1P50-201ENST00000532878 867 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC120024.1-201ENST00000562672 995 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC007342.1-201ENST00000565073 706 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 MTCO3P13-201ENST00000577757 781 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 OR13Z2P-201ENST00000606338 555 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 RNU4-89P-201ENST00000607443 133 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AL162574.1-201ENST00000615702 950 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC106730.3-201ENST00000624568 641 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AL357143.2-201ENST00000640266 421 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 AC018717.1-201ENST00000457712 1505 ntBASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
KRTAP4-4Q9BYR3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC096887.2-201ENST00000623443 1957 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CD9-212ENST00000610354 1315 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 PTN-202ENST00000393083 1599 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ANKRD7-201ENST00000265224 1298 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 SMIM9-201ENST00000369529 904 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 C1DP2-201ENST00000418167 426 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CDY14P-201ENST00000431260 1014 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 KRT16P3-201ENST00000439127 1283 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms