Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTFDC1Q9BY42 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 TMPOP1-202ENST00000424642 1267 ntBASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 AL353807.1-201ENST00000427475 662 ntBASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 AL355355.2-201ENST00000442321 338 ntBASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RTFDC1Q9BY42 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 RN7SL850P-201ENST00000579959 291 ntBASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 AL445228.2-201ENST00000605589 952 ntBASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.79■■□□□ 1.56
RTFDC1Q9BY42 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTFDC1Q9BY42 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 NBPF21P-201ENST00000425093 1451 ntBASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTFDC1Q9BY42 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 FAM197Y1-201ENST00000421178 764 ntBASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.76■■□□□ 1.55
RTFDC1Q9BY42 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 AC011484.1-201ENST00000377652 1995 ntBASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 AC145285.6-201ENST00000604632 637 ntBASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 AC073195.1-201ENST00000607241 877 ntBASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTFDC1Q9BY42 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms