Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMOQ99835 AC008403.3-201ENST00000598924 454 ntBASIC21.31■■□□□ 1
SMOQ99835 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.31■■□□□ 1
SMOQ99835 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.31■■□□□ 1
SMOQ99835 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.31■■□□□ 1
SMOQ99835 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.3■■□□□ 1
SMOQ99835 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.3■■□□□ 1
SMOQ99835 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.3■■□□□ 1
SMOQ99835 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.3■■□□□ 1
SMOQ99835 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SMOQ99835 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.3■■□□□ 1
SMOQ99835 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMOQ99835 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.29■■□□□ 1
SMOQ99835 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.29■■□□□ 1
SMOQ99835 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMOQ99835 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.29■■□□□ 1
SMOQ99835 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.29■■□□□ 1
SMOQ99835 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SMOQ99835 FAM201B-201ENST00000458407 597 ntBASIC21.29■■□□□ 1
SMOQ99835 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMOQ99835 AC026366.1-201ENST00000488803 879 ntBASIC21.29■■□□□ 1
SMOQ99835 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SMOQ99835 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.29■■□□□ 1
SMOQ99835 AP003097.1-201ENST00000530657 1135 ntBASIC21.29■■□□□ 1
SMOQ99835 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SMOQ99835 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMOQ99835 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMOQ99835 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMOQ99835 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMOQ99835 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMOQ99835 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.28■■□□□ 1
SMOQ99835 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.28■■□□□ 1
SMOQ99835 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.28■■□□□ 1
SMOQ99835 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.28■■□□□ 1
SMOQ99835 UNC93B4-201ENST00000505679 747 ntBASIC21.28■■□□□ 1
SMOQ99835 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMOQ99835 SOX15-203ENST00000570788 1093 ntBASIC21.28■■□□□ 1
SMOQ99835 AC005829.2-201ENST00000571422 1056 ntBASIC21.28■■□□□ 1
SMOQ99835 PTBP1P-201ENST00000554374 1601 ntBASIC21.28■■□□□ 1
SMOQ99835 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.28■■□□□ 1
SMOQ99835 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.28■■□□□ 1
SMOQ99835 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.28■■□□□ 1
SMOQ99835 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.28■■□□□ 1
SMOQ99835 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMOQ99835 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SMOQ99835 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.28■■□□□ 1
SMOQ99835 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.28■■□□□ 1
SMOQ99835 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.28■■□□□ 1
SMOQ99835 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SMOQ99835 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SMOQ99835 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.27■■□□□ 1
SMOQ99835 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.27■■□□□ 1
SMOQ99835 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.27■■□□□ 1
SMOQ99835 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMOQ99835 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.27■■□□□ 1
SMOQ99835 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.27■■□□□ 1
SMOQ99835 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SMOQ99835 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.27■■□□□ 1
SMOQ99835 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.27■■□□□ 1
SMOQ99835 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMOQ99835 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMOQ99835 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SMOQ99835 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SMOQ99835 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMOQ99835 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SMOQ99835 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.26■□□□□ 0.99
SMOQ99835 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.26■□□□□ 0.99
SMOQ99835 AC092720.2-201ENST00000602388 1665 ntBASIC21.26■□□□□ 0.99
SMOQ99835 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.26■□□□□ 0.99
SMOQ99835 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.26■□□□□ 0.99
SMOQ99835 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SMOQ99835 AC006557.6-201ENST00000623071 864 ntBASIC21.26■□□□□ 0.99
SMOQ99835 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SMOQ99835 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMOQ99835 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
SMOQ99835 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMOQ99835 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SMOQ99835 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms