Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DUX3Q96PT4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 UNC93B5-201ENST00000530315 699 ntBASIC15.75■□□□□ 0.11
DUX3Q96PT4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DUX3Q96PT4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DUX3Q96PT4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
DUX3Q96PT4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DUX3Q96PT4 AC092368.3-202ENST00000574180 1591 ntBASIC15.75■□□□□ 0.11
DUX3Q96PT4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 AP003097.1-201ENST00000530657 1135 ntBASIC15.74■□□□□ 0.11
DUX3Q96PT4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX3Q96PT4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX3Q96PT4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 AC128676.1-201ENST00000454392 318 ntBASIC15.73■□□□□ 0.11
DUX3Q96PT4 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 AC060766.5-201ENST00000590539 871 ntBASIC15.73■□□□□ 0.11
DUX3Q96PT4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DUX3Q96PT4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX3Q96PT4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 AC087633.2-202ENST00000565166 1439 ntBASIC15.72■□□□□ 0.11
DUX3Q96PT4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 AL158047.1-201ENST00000445918 881 ntBASIC15.72■□□□□ 0.11
DUX3Q96PT4 RPS2P52-201ENST00000469610 820 ntBASIC15.72■□□□□ 0.11
DUX3Q96PT4 AC026366.1-201ENST00000488803 879 ntBASIC15.72■□□□□ 0.11
DUX3Q96PT4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DUX3Q96PT4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX3Q96PT4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms