Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF558Q96NG5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF558Q96NG5 KRT8P36-201ENST00000489121 1440 ntBASIC21.64■■□□□ 1.06
ZNF558Q96NG5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.64■■□□□ 1.06
ZNF558Q96NG5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF558Q96NG5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
ZNF558Q96NG5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 KRT18P21-201ENST00000515767 1272 ntBASIC21.64■■□□□ 1.05
ZNF558Q96NG5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 AL355075.4-201ENST00000554988 638 ntBASIC21.64■■□□□ 1.05
ZNF558Q96NG5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.64■■□□□ 1.05
ZNF558Q96NG5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
ZNF558Q96NG5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 MIR2861-201ENST00000636310 90 ntBASIC21.63■■□□□ 1.05
ZNF558Q96NG5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF558Q96NG5 AC244015.2-201ENST00000616358 1861 ntBASIC21.62■■□□□ 1.05
ZNF558Q96NG5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 KRT16P5-201ENST00000455284 522 ntBASIC21.62■■□□□ 1.05
ZNF558Q96NG5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF558Q96NG5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 HTR7P1-201ENST00000538670 1336 ntBASIC21.61■■□□□ 1.05
ZNF558Q96NG5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 NBPF21P-201ENST00000425093 1451 ntBASIC21.61■■□□□ 1.05
ZNF558Q96NG5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.61■■□□□ 1.05
ZNF558Q96NG5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 AC026471.5-201ENST00000615068 467 ntBASIC21.61■■□□□ 1.05
ZNF558Q96NG5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF558Q96NG5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 AC124283.5-201ENST00000624661 1809 ntBASIC21.6■■□□□ 1.05
ZNF558Q96NG5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 AC010331.1-201ENST00000611423 582 ntBASIC21.6■■□□□ 1.05
ZNF558Q96NG5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF558Q96NG5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms