Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP54Q96N23 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.01■□□□□ 0.79
CFAP54Q96N23 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP54Q96N23 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP54Q96N23 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20■□□□□ 0.79
CFAP54Q96N23 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20■□□□□ 0.79
CFAP54Q96N23 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
CFAP54Q96N23 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP54Q96N23 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20■□□□□ 0.79
CFAP54Q96N23 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20■□□□□ 0.79
CFAP54Q96N23 AC069148.1-201ENST00000608741 768 ntBASIC20■□□□□ 0.79
CFAP54Q96N23 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20■□□□□ 0.79
CFAP54Q96N23 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20■□□□□ 0.79
CFAP54Q96N23 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CFAP54Q96N23 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 AC124283.5-201ENST00000624661 1809 ntBASIC19.99■□□□□ 0.79
CFAP54Q96N23 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 AL671277.2-201ENST00000458060 996 ntBASIC19.99■□□□□ 0.79
CFAP54Q96N23 AC116562.2-201ENST00000507042 360 ntBASIC19.99■□□□□ 0.79
CFAP54Q96N23 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP54Q96N23 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.99■□□□□ 0.79
CFAP54Q96N23 AL671883.3-201ENST00000603274 991 ntBASIC19.99■□□□□ 0.79
CFAP54Q96N23 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 AC128688.1-201ENST00000487626 519 ntBASIC19.98■□□□□ 0.79
CFAP54Q96N23 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP54Q96N23 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP54Q96N23 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP54Q96N23 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP54Q96N23 KRT8P45-201ENST00000414328 1447 ntBASIC19.98■□□□□ 0.79
CFAP54Q96N23 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 AC091390.4-202ENST00000476426 537 ntBASIC19.98■□□□□ 0.79
CFAP54Q96N23 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.98■□□□□ 0.79
CFAP54Q96N23 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.98■□□□□ 0.79
CFAP54Q96N23 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP54Q96N23 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 AC005332.1-201ENST00000577698 1310 ntBASIC19.97■□□□□ 0.79
CFAP54Q96N23 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 RN7SL510P-201ENST00000581311 263 ntBASIC19.97■□□□□ 0.79
CFAP54Q96N23 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 AC139887.4-201ENST00000607877 719 ntBASIC19.97■□□□□ 0.79
CFAP54Q96N23 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP54Q96N23 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP54Q96N23 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms