Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDLIM5Q96HC4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM5Q96HC4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 KRT18P68-201ENST00000392293 1000 ntBASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 AL512625.2-201ENST00000417533 625 ntBASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 AC008694.1-202ENST00000636953 945 ntBASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDLIM5Q96HC4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 TCF3P1-201ENST00000423021 1937 ntBASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 AC092437.1-201ENST00000624794 1048 ntBASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDLIM5Q96HC4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 CYP2T3P-201ENST00000601990 817 ntBASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM5Q96HC4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 AC105020.6-201ENST00000621523 1217 ntBASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PDLIM5Q96HC4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms