Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
DDX11Q96FC9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX11Q96FC9 AC010980.2-201ENST00000587099 1412 ntBASIC24.01■■□□□ 1.43
DDX11Q96FC9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX11Q96FC9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX11Q96FC9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX11Q96FC9 AL391422.3-201ENST00000603791 2761 ntBASIC24.01■■□□□ 1.43
DDX11Q96FC9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.01■■□□□ 1.43
DDX11Q96FC9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX11Q96FC9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
DDX11Q96FC9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX11Q96FC9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24■■□□□ 1.43
DDX11Q96FC9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX11Q96FC9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
DDX11Q96FC9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24■■□□□ 1.43
DDX11Q96FC9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
DDX11Q96FC9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
DDX11Q96FC9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
DDX11Q96FC9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24■■□□□ 1.43
DDX11Q96FC9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24■■□□□ 1.43
DDX11Q96FC9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24■■□□□ 1.43
DDX11Q96FC9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX11Q96FC9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX11Q96FC9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24■■□□□ 1.43
DDX11Q96FC9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX11Q96FC9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 KRT18P29-201ENST00000397031 1267 ntBASIC23.99■■□□□ 1.43
DDX11Q96FC9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX11Q96FC9 AL121603.2-201ENST00000557373 2117 ntBASIC23.99■■□□□ 1.43
DDX11Q96FC9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX11Q96FC9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX11Q96FC9 GABARAPL3-202ENST00000624044 1851 ntBASIC23.98■■□□□ 1.43
DDX11Q96FC9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX11Q96FC9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
DDX11Q96FC9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX11Q96FC9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX11Q96FC9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX11Q96FC9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX11Q96FC9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX11Q96FC9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX11Q96FC9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX11Q96FC9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX11Q96FC9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX11Q96FC9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.97■■□□□ 1.43
DDX11Q96FC9 AC083880.1-201ENST00000608266 535 ntBASIC23.97■■□□□ 1.43
DDX11Q96FC9 ITM2C-210ENST00000620962 501 ntBASIC23.97■■□□□ 1.43
DDX11Q96FC9 PCDHAC2-203ENST00000615316 3011 ntBASIC23.97■■□□□ 1.43
DDX11Q96FC9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX11Q96FC9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms