Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 AC034268.1-201ENST00000441047 882 ntBASIC21.24■□□□□ 0.99
RNF25Q96BH1 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 AC087623.3-201ENST00000607047 1098 ntBASIC21.24■□□□□ 0.99
RNF25Q96BH1 MYCNOS-205ENST00000641950 531 ntBASIC21.24■□□□□ 0.99
RNF25Q96BH1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.23■□□□□ 0.99
RNF25Q96BH1 SMG8-203ENST00000578922 2178 ntBASIC21.23■□□□□ 0.99
RNF25Q96BH1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF25Q96BH1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF25Q96BH1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF25Q96BH1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF25Q96BH1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF25Q96BH1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF25Q96BH1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 AC098799.1-201ENST00000504752 800 ntBASIC21.21■□□□□ 0.99
RNF25Q96BH1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF25Q96BH1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
RNF25Q96BH1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF25Q96BH1 MIR6821-201ENST00000617625 74 ntBASIC21.21■□□□□ 0.99
RNF25Q96BH1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF25Q96BH1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.2■□□□□ 0.99
RNF25Q96BH1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF25Q96BH1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
RNF25Q96BH1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF25Q96BH1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF25Q96BH1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF25Q96BH1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms