Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.96■□□□□ 0.63
CT55Q8WUE5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.96■□□□□ 0.63
CT55Q8WUE5 AC023632.3-201ENST00000521633 145 ntBASIC18.96■□□□□ 0.63
CT55Q8WUE5 AP001412.1-201ENST00000608405 714 ntBASIC18.96■□□□□ 0.63
CT55Q8WUE5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.96■□□□□ 0.63
CT55Q8WUE5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CT55Q8WUE5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CT55Q8WUE5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CT55Q8WUE5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.96■□□□□ 0.63
CT55Q8WUE5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CT55Q8WUE5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CT55Q8WUE5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CT55Q8WUE5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 ECEL1P3-201ENST00000427961 737 ntBASIC18.95■□□□□ 0.62
CT55Q8WUE5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 REXO1L12P-201ENST00000622156 912 ntBASIC18.95■□□□□ 0.62
CT55Q8WUE5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
CT55Q8WUE5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 KRT17P2-201ENST00000300992 1314 ntBASIC18.95■□□□□ 0.62
CT55Q8WUE5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CT55Q8WUE5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 RARRES2P10-201ENST00000564312 460 ntBASIC18.94■□□□□ 0.62
CT55Q8WUE5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 AC113410.3-201ENST00000623366 203 ntBASIC18.94■□□□□ 0.62
CT55Q8WUE5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.94■□□□□ 0.62
CT55Q8WUE5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CT55Q8WUE5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 AL024507.2-201ENST00000606070 2574 ntBASIC18.93■□□□□ 0.62
CT55Q8WUE5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CT55Q8WUE5 AC121338.2-201ENST00000622535 1744 ntBASIC18.93■□□□□ 0.62
CT55Q8WUE5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CT55Q8WUE5 AC124283.5-201ENST00000624661 1809 ntBASIC18.93■□□□□ 0.62
CT55Q8WUE5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 AL049796.1-201ENST00000565336 1766 ntBASIC18.92■□□□□ 0.62
CT55Q8WUE5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 AC211429.1-201ENST00000415277 523 ntBASIC18.92■□□□□ 0.62
CT55Q8WUE5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.92■□□□□ 0.62
CT55Q8WUE5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 BX088651.1-201ENST00000540551 451 ntBASIC18.92■□□□□ 0.62
CT55Q8WUE5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CT55Q8WUE5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms