Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 SMG8-203ENST00000578922 2178 ntBASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 FAM201B-201ENST00000458407 597 ntBASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM3Q8TF72 AC069152.1-201ENST00000438030 544 ntBASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHROOM3Q8TF72 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SHROOM3Q8TF72 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 AC112907.3-201ENST00000577781 2400 ntBASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHROOM3Q8TF72 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 AC099778.1-201ENST00000568593 1911 ntBASIC20.67■□□□□ 0.9
SHROOM3Q8TF72 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 AL121832.2-201ENST00000610979 668 ntBASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM3Q8TF72 DPP3P2-201ENST00000416030 1696 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms