Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 AL024507.2-201ENST00000606070 2574 ntBASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 AL596275.1-201ENST00000423464 877 ntBASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 AC008550.1-201ENST00000511500 884 ntBASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF2Q8TEC5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 AC027702.1-201ENST00000563810 1770 ntBASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF2Q8TEC5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SH3RF2Q8TEC5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 AC120498.8-201ENST00000614275 531 ntBASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3RF2Q8TEC5 AL049796.1-201ENST00000565336 1766 ntBASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms