Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 AC010203.1-204ENST00000548782 407 ntBASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 BX664615.1-201ENST00000443558 458 ntBASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 KRT8P36-201ENST00000489121 1440 ntBASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 AC023632.3-201ENST00000521633 145 ntBASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 DGCR10-201ENST00000609839 495 ntBASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 AP000550.4-202ENST00000639755 178 ntBASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
ALMS1Q8TCU4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 ATP5G1P1-201ENST00000448724 379 ntBASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 ECEL1P2-202ENST00000465689 757 ntBASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 B3GAT3P1-201ENST00000471720 806 ntBASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 AC117947.1-201ENST00000427448 529 ntBASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.78□□□□□ -0.2
ALMS1Q8TCU4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 AL121906.2-201ENST00000621597 723 ntBASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALMS1Q8TCU4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALMS1Q8TCU4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 PGM5P4-201ENST00000421970 445 ntBASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms