Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC145350.3-201ENST00000569033 163 ntBASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 RNF165-205ENST00000588679 2904 ntBASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZNF439Q8NDP4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 AC006015.1-201ENST00000429970 570 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 CDV3P1-201ENST00000471403 739 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 AL162430.1-201ENST00000480705 870 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 AC007322.4-201ENST00000509611 723 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 MFSD11-216ENST00000590393 1141 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF439Q8NDP4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 MIR5787-201ENST00000611784 55 ntBASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF439Q8NDP4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF439Q8NDP4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms