Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LINC01555Q8NAE3 AP005212.1-201ENST00000581547 1997 ntBASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 AL157384.1-201ENST00000445995 2473 ntBASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LINC01555Q8NAE3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 HLA-B-256ENST00000639848 1089 ntBASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LINC01555Q8NAE3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.52■□□□□ 0.71
LINC01555Q8NAE3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC01555Q8NAE3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.52■□□□□ 0.71
LINC01555Q8NAE3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC01555Q8NAE3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.52■□□□□ 0.71
LINC01555Q8NAE3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC01555Q8NAE3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 PTBP1P-201ENST00000554374 1601 ntBASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 AC020907.5-201ENST00000624372 1936 ntBASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 RNA5SP413-201ENST00000516373 109 ntBASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01555Q8NAE3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 DPP3P2-201ENST00000416030 1696 ntBASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 CD99P1-205ENST00000527459 561 ntBASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 AC060766.5-201ENST00000590539 871 ntBASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 AC092667.1-201ENST00000434301 2586 ntBASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01555Q8NAE3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms