Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 KRT87P-202ENST00000534226 1464 ntBASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNLDC1Q8NA58 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.64■□□□□ 0.42
PNLDC1Q8NA58 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PNLDC1Q8NA58 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 AC245052.3-201ENST00000450182 901 ntBASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 AC022517.1-201ENST00000592429 346 ntBASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.64■□□□□ 0.41
PNLDC1Q8NA58 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 AL391422.3-201ENST00000603791 2761 ntBASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 AL137784.2-201ENST00000607332 1000 ntBASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 AC092720.2-201ENST00000602388 1665 ntBASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNLDC1Q8NA58 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 KRT16P2-201ENST00000414673 1423 ntBASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 AC004854.2-201ENST00000608450 1441 ntBASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNLDC1Q8NA58 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PNLDC1Q8NA58 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms