Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 AC116562.4-201ENST00000641316 2276 ntBASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC71LQ8N9Z2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CCDC71LQ8N9Z2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC71LQ8N9Z2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 POU5F1P4-201ENST00000413175 1085 ntBASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 MIR4767-201ENST00000582827 78 ntBASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71LQ8N9Z2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71LQ8N9Z2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 AC245052.3-201ENST00000450182 901 ntBASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71LQ8N9Z2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 MIR2861-201ENST00000636310 90 ntBASIC16.8■□□□□ 0.28
CCDC71LQ8N9Z2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms