Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD1Q8N668 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 LETM1P2-201ENST00000597330 2178 ntBASIC16.75■□□□□ 0.27
COMMD1Q8N668 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 KRT18P11-201ENST00000435214 1283 ntBASIC16.75■□□□□ 0.27
COMMD1Q8N668 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 TNXA-203ENST00000507684 2038 ntBASIC16.75■□□□□ 0.27
COMMD1Q8N668 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
COMMD1Q8N668 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD1Q8N668 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 AP004607.4-201ENST00000530158 1459 ntBASIC16.74■□□□□ 0.27
COMMD1Q8N668 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.74■□□□□ 0.27
COMMD1Q8N668 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD1Q8N668 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AC020907.5-201ENST00000624372 1936 ntBASIC16.73■□□□□ 0.27
COMMD1Q8N668 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AC016769.1-201ENST00000409132 1010 ntBASIC16.73■□□□□ 0.27
COMMD1Q8N668 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 AC055733.4-201ENST00000638462 1354 ntBASIC16.73■□□□□ 0.27
COMMD1Q8N668 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COMMD1Q8N668 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD1Q8N668 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms