Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 NBPF21P-201ENST00000425093 1451 ntBASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 AC079598.2-202ENST00000546624 1451 ntBASIC19.27■□□□□ 0.68
COL27A1Q8IZC6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL27A1Q8IZC6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.27■□□□□ 0.67
COL27A1Q8IZC6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL27A1Q8IZC6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
COL27A1Q8IZC6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL27A1Q8IZC6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 RBM17P1-201ENST00000453646 1190 ntBASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL27A1Q8IZC6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 HTR7P1-201ENST00000538670 1336 ntBASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 TMPOP1-202ENST00000424642 1267 ntBASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 AL390955.1-201ENST00000428694 934 ntBASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 KRT18P35-201ENST00000510488 1269 ntBASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 FAM197Y1-201ENST00000421178 764 ntBASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 AC011484.1-201ENST00000377652 1995 ntBASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
COL27A1Q8IZC6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 AC027702.1-201ENST00000563810 1770 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms