Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 PGM5P4-201ENST00000421970 445 ntBASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 CDCA4P2-201ENST00000441182 718 ntBASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 AL356652.1-201ENST00000615962 565 ntBASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 AL391422.3-201ENST00000603791 2761 ntBASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 AC087633.2-202ENST00000565166 1439 ntBASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 AC005181.1-201ENST00000604782 1256 ntBASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC116Q8IYX3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC116Q8IYX3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 MCRIP2P1-201ENST00000394346 511 ntBASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 AC100791.3-201ENST00000617619 330 ntBASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC116Q8IYX3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 SMG8-203ENST00000578922 2178 ntBASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC116Q8IYX3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 AL162377.1-201ENST00000618844 1793 ntBASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC116Q8IYX3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms