Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 RCN1P1-201ENST00000400413 996 ntBASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 AC097493.4-201ENST00000641197 219 ntBASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEFF1Q8IYR6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 AC012306.2-201ENST00000609350 630 ntBASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEFF1Q8IYR6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 AC026471.5-201ENST00000615068 467 ntBASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEFF1Q8IYR6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 AP003071.4-201ENST00000562276 1284 ntBASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEFF1Q8IYR6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
TMEFF1Q8IYR6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms