Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DHX40Q8IX18 AC010141.2-201ENST00000452426 721 ntBASIC22.51■■□□□ 1.19
DHX40Q8IX18 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DHX40Q8IX18 SLC7A5P2-201ENST00000553010 536 ntBASIC22.51■■□□□ 1.19
DHX40Q8IX18 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.51■■□□□ 1.19
DHX40Q8IX18 AC092666.2-201ENST00000613287 246 ntBASIC22.51■■□□□ 1.19
DHX40Q8IX18 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
DHX40Q8IX18 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
DHX40Q8IX18 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DHX40Q8IX18 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.51■■□□□ 1.19
DHX40Q8IX18 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DHX40Q8IX18 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
DHX40Q8IX18 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
DHX40Q8IX18 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.51■■□□□ 1.19
DHX40Q8IX18 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 MIR6084-201ENST00000622012 110 ntBASIC22.5■■□□□ 1.19
DHX40Q8IX18 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 AC005332.7-201ENST00000614046 2005 ntBASIC22.5■■□□□ 1.19
DHX40Q8IX18 BX119927.1-201ENST00000636596 1552 ntBASIC22.5■■□□□ 1.19
DHX40Q8IX18 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
DHX40Q8IX18 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DHX40Q8IX18 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 MIR5787-201ENST00000611784 55 ntBASIC22.49■■□□□ 1.19
DHX40Q8IX18 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DHX40Q8IX18 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
DHX40Q8IX18 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
DHX40Q8IX18 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 TREX1-205ENST00000625293 1783 ntBASIC22.48■■□□□ 1.19
DHX40Q8IX18 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.48■■□□□ 1.19
DHX40Q8IX18 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.48■■□□□ 1.19
DHX40Q8IX18 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.48■■□□□ 1.19
DHX40Q8IX18 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.48■■□□□ 1.19
DHX40Q8IX18 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DHX40Q8IX18 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.48■■□□□ 1.19
DHX40Q8IX18 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 MIR6821-201ENST00000617625 74 ntBASIC22.47■■□□□ 1.19
DHX40Q8IX18 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.47■■□□□ 1.19
DHX40Q8IX18 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DHX40Q8IX18 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
DHX40Q8IX18 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DHX40Q8IX18 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DHX40Q8IX18 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.46■■□□□ 1.19
DHX40Q8IX18 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.46■■□□□ 1.19
DHX40Q8IX18 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DHX40Q8IX18 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.46■■□□□ 1.19
DHX40Q8IX18 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DHX40Q8IX18 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms