Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 FAM21FP-204ENST00000608637 956 ntBASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC83Q8IWF9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC83Q8IWF9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC83Q8IWF9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 KRT18P5-201ENST00000436075 1291 ntBASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC83Q8IWF9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 AC016405.3-201ENST00000607710 860 ntBASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC83Q8IWF9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms