Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A2Q8IWA5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A2Q8IWA5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC44A2Q8IWA5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 AC006015.1-201ENST00000429970 570 ntBASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 AC020907.5-201ENST00000624372 1936 ntBASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A2Q8IWA5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 AC243732.1-201ENST00000612648 864 ntBASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 AC010536.3-201ENST00000620306 533 ntBASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC44A2Q8IWA5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 MFSD11-216ENST00000590393 1141 ntBASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC44A2Q8IWA5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 TERF1P5-201ENST00000477545 1207 ntBASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 IKBKGP1-201ENST00000612193 1073 ntBASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC44A2Q8IWA5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 AC011767.1-201ENST00000617410 1153 ntBASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 BID-214ENST00000617586 542 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC44A2Q8IWA5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms