Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 AC010536.3-201ENST00000620306 533 ntBASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 TERF1P5-201ENST00000477545 1207 ntBASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00346Q8IVM7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00346Q8IVM7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 RARRES2P6-201ENST00000567333 442 ntBASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 FAM21FP-204ENST00000608637 956 ntBASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00346Q8IVM7 KRT8P36-201ENST00000489121 1440 ntBASIC17.89■□□□□ 0.46
LINC00346Q8IVM7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LINC00346Q8IVM7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 AC026271.2-201ENST00000428091 497 ntBASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms