Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 FP700111.2-201ENST00000619190 1892 ntBASIC17.98■□□□□ 0.47
LRRC28Q86X40 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
LRRC28Q86X40 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC28Q86X40 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 AC022517.1-201ENST00000592429 346 ntBASIC17.97■□□□□ 0.47
LRRC28Q86X40 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC28Q86X40 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC28Q86X40 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC28Q86X40 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC28Q86X40 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC28Q86X40 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.96■□□□□ 0.47
LRRC28Q86X40 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 AC079140.4-201ENST00000507448 529 ntBASIC17.96■□□□□ 0.47
LRRC28Q86X40 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC28Q86X40 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC28Q86X40 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC28Q86X40 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC28Q86X40 TCF3P1-201ENST00000423021 1937 ntBASIC17.96■□□□□ 0.47
LRRC28Q86X40 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
LRRC28Q86X40 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC28Q86X40 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC28Q86X40 AP004607.4-201ENST00000530158 1459 ntBASIC17.95■□□□□ 0.46
LRRC28Q86X40 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC28Q86X40 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC28Q86X40 AC055733.4-201ENST00000638462 1354 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms