Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PNMA6B-201ENST00000538162 1200 ntBASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 MIR4651-201ENST00000582622 73 ntBASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
LRRTM4Q86VH4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRTM4Q86VH4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 UNC93B5-201ENST00000530315 699 ntBASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRTM4Q86VH4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRTM4Q86VH4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 TSPY20P-201ENST00000450910 630 ntBASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRRTM4Q86VH4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 FAM201B-201ENST00000458407 597 ntBASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM4Q86VH4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms