Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALYREFQ86V81 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 AC092667.1-201ENST00000434301 2586 ntBASIC21.19■□□□□ 0.98
ALYREFQ86V81 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 LSM12P1-201ENST00000411836 588 ntBASIC21.19■□□□□ 0.98
ALYREFQ86V81 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.19■□□□□ 0.98
ALYREFQ86V81 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.19■□□□□ 0.98
ALYREFQ86V81 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 AC005363.2-201ENST00000618631 242 ntBASIC21.19■□□□□ 0.98
ALYREFQ86V81 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.19■□□□□ 0.98
ALYREFQ86V81 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.19■□□□□ 0.98
ALYREFQ86V81 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALYREFQ86V81 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.19■□□□□ 0.98
ALYREFQ86V81 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALYREFQ86V81 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALYREFQ86V81 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 AC005521.1-201ENST00000393351 872 ntBASIC21.18■□□□□ 0.98
ALYREFQ86V81 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALYREFQ86V81 AC138907.5-202ENST00000569484 235 ntBASIC21.18■□□□□ 0.98
ALYREFQ86V81 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALYREFQ86V81 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALYREFQ86V81 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.18■□□□□ 0.98
ALYREFQ86V81 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALYREFQ86V81 AL121603.2-201ENST00000557373 2117 ntBASIC21.17■□□□□ 0.98
ALYREFQ86V81 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ALYREFQ86V81 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALYREFQ86V81 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 AC069544.1-201ENST00000609399 999 ntBASIC21.16■□□□□ 0.98
ALYREFQ86V81 AC006557.6-201ENST00000623071 864 ntBASIC21.16■□□□□ 0.98
ALYREFQ86V81 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALYREFQ86V81 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.16■□□□□ 0.98
ALYREFQ86V81 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALYREFQ86V81 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALYREFQ86V81 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALYREFQ86V81 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALYREFQ86V81 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.15■□□□□ 0.98
ALYREFQ86V81 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms