Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 TNXA-203ENST00000507684 2038 ntBASIC19.66■□□□□ 0.74
RNF111Q6ZNA4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 AC138907.5-202ENST00000569484 235 ntBASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF111Q6ZNA4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
RNF111Q6ZNA4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF111Q6ZNA4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 TCF3P1-201ENST00000423021 1937 ntBASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 AL158211.5-201ENST00000623583 2518 ntBASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF111Q6ZNA4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 AC010141.2-201ENST00000452426 721 ntBASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 AP001160.3-201ENST00000601484 763 ntBASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF111Q6ZNA4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 AC008175.2-201ENST00000612840 297 ntBASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF111Q6ZNA4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms