Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SHC4Q6S5L8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHC4Q6S5L8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHC4Q6S5L8 AC125437.2-201ENST00000625180 2167 ntBASIC22.9■■□□□ 1.26
SHC4Q6S5L8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.9■■□□□ 1.26
SHC4Q6S5L8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHC4Q6S5L8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.9■■□□□ 1.26
SHC4Q6S5L8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.89■■□□□ 1.26
SHC4Q6S5L8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHC4Q6S5L8 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.89■■□□□ 1.26
SHC4Q6S5L8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
SHC4Q6S5L8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHC4Q6S5L8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHC4Q6S5L8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 AL356652.1-201ENST00000615962 565 ntBASIC22.89■■□□□ 1.25
SHC4Q6S5L8 AC013268.1-206ENST00000638368 961 ntBASIC22.89■■□□□ 1.25
SHC4Q6S5L8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 AC112229.1-201ENST00000639295 961 ntBASIC22.89■■□□□ 1.25
SHC4Q6S5L8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHC4Q6S5L8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 CNN2P6-201ENST00000439038 900 ntBASIC22.88■■□□□ 1.25
SHC4Q6S5L8 AL162412.1-201ENST00000567129 965 ntBASIC22.88■■□□□ 1.25
SHC4Q6S5L8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.88■■□□□ 1.25
SHC4Q6S5L8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 AL691432.2-201ENST00000607222 2038 ntBASIC22.87■■□□□ 1.25
SHC4Q6S5L8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.87■■□□□ 1.25
SHC4Q6S5L8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 KRT18P11-201ENST00000435214 1283 ntBASIC22.87■■□□□ 1.25
SHC4Q6S5L8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 DUX4L16-201ENST00000555130 1264 ntBASIC22.87■■□□□ 1.25
SHC4Q6S5L8 RARRES2P6-201ENST00000567333 442 ntBASIC22.87■■□□□ 1.25
SHC4Q6S5L8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 AC011767.1-201ENST00000617410 1153 ntBASIC22.87■■□□□ 1.25
SHC4Q6S5L8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
SHC4Q6S5L8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 AC006015.1-201ENST00000429970 570 ntBASIC22.86■■□□□ 1.25
SHC4Q6S5L8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHC4Q6S5L8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.85■■□□□ 1.25
SHC4Q6S5L8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SHC4Q6S5L8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms