Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 AC007613.1-201ENST00000572811 2597 ntBASIC15.31■□□□□ 0.04
MRPL54Q6P161 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.31■□□□□ 0.04
MRPL54Q6P161 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRPL54Q6P161 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.3■□□□□ 0.04
MRPL54Q6P161 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.3■□□□□ 0.04
MRPL54Q6P161 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.3■□□□□ 0.04
MRPL54Q6P161 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.3■□□□□ 0.04
MRPL54Q6P161 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.3■□□□□ 0.04
MRPL54Q6P161 AL451085.2-201ENST00000605085 799 ntBASIC15.3■□□□□ 0.04
MRPL54Q6P161 AC068587.7-201ENST00000641602 218 ntBASIC15.3■□□□□ 0.04
MRPL54Q6P161 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.3■□□□□ 0.04
MRPL54Q6P161 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRPL54Q6P161 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 AC133637.1-201ENST00000624115 1537 ntBASIC15.29■□□□□ 0.04
MRPL54Q6P161 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MRPL54Q6P161 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPL54Q6P161 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 AC092720.2-201ENST00000602388 1665 ntBASIC15.28■□□□□ 0.04
MRPL54Q6P161 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 Z92544.1-202ENST00000571933 1220 ntBASIC15.28■□□□□ 0.04
MRPL54Q6P161 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms