Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC38Q5VT99 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.06■□□□□ 0.96
LRRC38Q5VT99 CNN2P6-201ENST00000439038 900 ntBASIC21.06■□□□□ 0.96
LRRC38Q5VT99 RARRES2P4-201ENST00000514074 484 ntBASIC21.06■□□□□ 0.96
LRRC38Q5VT99 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 DUX4L16-201ENST00000555130 1264 ntBASIC21.06■□□□□ 0.96
LRRC38Q5VT99 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC38Q5VT99 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 AFG3L1P-217ENST00000557444 2447 ntBASIC21.05■□□□□ 0.96
LRRC38Q5VT99 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 BX119927.1-201ENST00000636596 1552 ntBASIC21.05■□□□□ 0.96
LRRC38Q5VT99 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC38Q5VT99 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 PCDHAC2-203ENST00000615316 3011 ntBASIC21.04■□□□□ 0.96
LRRC38Q5VT99 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC38Q5VT99 AC068338.2-201ENST00000563278 1430 ntBASIC21.04■□□□□ 0.96
LRRC38Q5VT99 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 MCRIP2P1-201ENST00000394346 511 ntBASIC21.03■□□□□ 0.96
LRRC38Q5VT99 AC016769.1-201ENST00000409132 1010 ntBASIC21.03■□□□□ 0.96
LRRC38Q5VT99 RARRES2P6-201ENST00000567333 442 ntBASIC21.03■□□□□ 0.96
LRRC38Q5VT99 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
LRRC38Q5VT99 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms