Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 AC007322.4-201ENST00000509611 723 ntBASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 MIR5787-201ENST00000611784 55 ntBASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 DPP3P2-201ENST00000416030 1696 ntBASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A4Q4VNC1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 AC022517.1-201ENST00000592429 346 ntBASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 CYP21A1P-202ENST00000354927 1481 ntBASIC21.13■□□□□ 0.97
ATP13A4Q4VNC1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A4Q4VNC1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 TCF3P1-201ENST00000423021 1937 ntBASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A4Q4VNC1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 AL356652.1-201ENST00000615962 565 ntBASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A4Q4VNC1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 AL162412.1-201ENST00000567129 965 ntBASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 AC087633.2-202ENST00000565166 1439 ntBASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A4Q4VNC1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms