Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SPHKAPQ2M3C7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SPHKAPQ2M3C7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC29.39■■■□□ 2.29
SPHKAPQ2M3C7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC29.39■■■□□ 2.29
SPHKAPQ2M3C7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC29.39■■■□□ 2.29
SPHKAPQ2M3C7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC29.39■■■□□ 2.29
SPHKAPQ2M3C7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
SPHKAPQ2M3C7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SPHKAPQ2M3C7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
SPHKAPQ2M3C7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 AL049796.1-201ENST00000565336 1766 ntBASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SPHKAPQ2M3C7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 PRKY-204ENST00000533551 1019 ntBASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC29.35■■■□□ 2.29
SPHKAPQ2M3C7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 AC087499.1-201ENST00000418141 1075 ntBASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 KRT16P5-201ENST00000455284 522 ntBASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
SPHKAPQ2M3C7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPHKAPQ2M3C7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC29.32■■■□□ 2.28
SPHKAPQ2M3C7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPHKAPQ2M3C7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPHKAPQ2M3C7 NUDT16P1-203ENST00000513809 620 ntBASIC29.32■■■□□ 2.28
SPHKAPQ2M3C7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC29.32■■■□□ 2.28
SPHKAPQ2M3C7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms