Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.3■□□□□ 0.36
EFNB3Q15768 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
EFNB3Q15768 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.3■□□□□ 0.36
EFNB3Q15768 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 GCSHP5-201ENST00000443090 522 ntBASIC17.3■□□□□ 0.36
EFNB3Q15768 AC098590.1-201ENST00000468126 897 ntBASIC17.3■□□□□ 0.36
EFNB3Q15768 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.3■□□□□ 0.36
EFNB3Q15768 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
EFNB3Q15768 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNB3Q15768 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.3■□□□□ 0.36
EFNB3Q15768 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EFNB3Q15768 POM121L13P-201ENST00000422362 380 ntBASIC17.29■□□□□ 0.36
EFNB3Q15768 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.29■□□□□ 0.36
EFNB3Q15768 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.29■□□□□ 0.36
EFNB3Q15768 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.29■□□□□ 0.36
EFNB3Q15768 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EFNB3Q15768 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.29■□□□□ 0.36
EFNB3Q15768 AC066615.1-201ENST00000640911 628 ntBASIC17.29■□□□□ 0.36
EFNB3Q15768 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.29■□□□□ 0.36
EFNB3Q15768 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EFNB3Q15768 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFNB3Q15768 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 AL390719.1-204ENST00000412397 1219 ntBASIC17.28■□□□□ 0.36
EFNB3Q15768 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.28■□□□□ 0.36
EFNB3Q15768 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNB3Q15768 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 AC026310.3-201ENST00000625186 2373 ntBASIC17.28■□□□□ 0.36
EFNB3Q15768 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNB3Q15768 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EFNB3Q15768 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.27■□□□□ 0.36
EFNB3Q15768 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.27■□□□□ 0.36
EFNB3Q15768 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNB3Q15768 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
EFNB3Q15768 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.27■□□□□ 0.36
EFNB3Q15768 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFNB3Q15768 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.27■□□□□ 0.35
EFNB3Q15768 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNB3Q15768 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
EFNB3Q15768 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EFNB3Q15768 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNB3Q15768 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNB3Q15768 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNB3Q15768 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms