Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 YER121WYER121W 345 nt2.2□□□□□ -2.06
PDH1Q12428 PEX4YGR133W 552 nt2.2□□□□□ -2.06
PDH1Q12428 SWT1YOR166C 1377 nt2.2□□□□□ -2.06
PDH1Q12428 RTT101YJL047C 2529 nt2.2□□□□□ -2.06
PDH1Q12428 MLH1YMR167W 2310 nt2.19□□□□□ -2.06
PDH1Q12428 ALK2YBL009W 2031 nt2.19□□□□□ -2.06
PDH1Q12428 PEX8YGR077C 1770 nt2.19□□□□□ -2.06
PDH1Q12428 YER079C-AYER079C-A 339 nt2.19□□□□□ -2.06
PDH1Q12428 SNC1YAL030W 354 nt2.19□□□□□ -2.06
PDH1Q12428 RPL40BYKR094C 387 nt2.19□□□□□ -2.06
PDH1Q12428 FCF2YLR051C 654 nt2.19□□□□□ -2.06
PDH1Q12428 CGI121YML036W 546 nt2.19□□□□□ -2.06
PDH1Q12428 YNL146WYNL146W 303 nt2.19□□□□□ -2.06
PDH1Q12428 YPL038W-AYPL038W-A 192 nt2.19□□□□□ -2.06
PDH1Q12428 SAP185YJL098W 3177 nt2.19□□□□□ -2.06
PDH1Q12428 YJR003CYJR003C 1560 nt2.19□□□□□ -2.06
PDH1Q12428 TOF1YNL273W 3717 nt2.18□□□□□ -2.06
PDH1Q12428 DAD4YDR320C-A 219 nt2.18□□□□□ -2.06
PDH1Q12428 YPR016W-AYPR016W-A 261 nt2.18□□□□□ -2.06
PDH1Q12428 YPR146CYPR146C 330 nt2.18□□□□□ -2.06
PDH1Q12428 YSY6YBR162W-A 198 nt2.18□□□□□ -2.06
PDH1Q12428 TRL1YJL087C 2484 nt2.18□□□□□ -2.06
PDH1Q12428 RGA1YOR127W 3024 nt2.17□□□□□ -2.06
PDH1Q12428 GYP5YPL249C 2685 nt2.17□□□□□ -2.06
PDH1Q12428 INO80YGL150C 4470 nt2.17□□□□□ -2.06
PDH1Q12428 YKL136WYKL136W 399 nt2.17□□□□□ -2.06
PDH1Q12428 GRX8YLR364W 330 nt2.17□□□□□ -2.06
PDH1Q12428 RPL9BYNL067W 576 nt2.17□□□□□ -2.06
PDH1Q12428 YOR333CYOR333C 417 nt2.17□□□□□ -2.06
PDH1Q12428 RTC6YPL183W-A 282 nt2.17□□□□□ -2.06
PDH1Q12428 KAR3YPR141C 2190 nt2.17□□□□□ -2.06
PDH1Q12428 NOP10YHR072W-A 177 nt2.16□□□□□ -2.06
PDH1Q12428 ANS1YHR126C 480 nt2.16□□□□□ -2.06
PDH1Q12428 MNE1YOR350C 1992 nt2.15□□□□□ -2.07
PDH1Q12428 VPS8YAL002W 3825 nt2.14□□□□□ -2.07
PDH1Q12428 YNL277W-AYNL277W-A 189 nt2.14□□□□□ -2.07
PDH1Q12428 BFA1YJR053W 1725 nt2.14□□□□□ -2.07
PDH1Q12428 CDC60YPL160W 3273 nt2.13□□□□□ -2.07
PDH1Q12428 COS111YBR203W 2775 nt2.13□□□□□ -2.07
PDH1Q12428 TFC3YAL001C 3483 nt2.13□□□□□ -2.07
PDH1Q12428 YDL011CYDL011C 324 nt2.13□□□□□ -2.07
PDH1Q12428 YGL024WYGL024W 336 nt2.13□□□□□ -2.07
PDH1Q12428 SMD1YGR074W 441 nt2.13□□□□□ -2.07
PDH1Q12428 YBR121C-AYBR121C-A 159 nt2.13□□□□□ -2.07
PDH1Q12428 SEC16YPL085W 6588 nt2.12□□□□□ -2.07
PDH1Q12428 PCF11YDR228C 1881 nt2.12□□□□□ -2.07
PDH1Q12428 BNI1YNL271C 5862 nt2.12□□□□□ -2.07
PDH1Q12428 RPL27BYDR471W 411 nt2.12□□□□□ -2.07
PDH1Q12428 QCR7YDR529C 384 nt2.12□□□□□ -2.07
PDH1Q12428 MRPL31YKL138C 396 nt2.12□□□□□ -2.07
PDH1Q12428 YKR075W-AYKR075W-A 270 nt2.12□□□□□ -2.07
PDH1Q12428 YAF9YNL107W 681 nt2.12□□□□□ -2.07
PDH1Q12428 BIL1YOR304C-A 231 nt2.12□□□□□ -2.07
PDH1Q12428 YPL182CYPL182C 384 nt2.12□□□□□ -2.07
PDH1Q12428 YPL225WYPL225W 441 nt2.12□□□□□ -2.07
PDH1Q12428 SGD1YLR336C 2700 nt2.12□□□□□ -2.07
PDH1Q12428 GRR1YJR090C 3456 nt2.12□□□□□ -2.07
PDH1Q12428 BUD2YKL092C 3315 nt2.12□□□□□ -2.07
PDH1Q12428 CRM1YGR218W 3255 nt2.11□□□□□ -2.07
PDH1Q12428 WIP1YDR374W-A 270 nt2.11□□□□□ -2.07
PDH1Q12428 YAR053WYAR053W 297 nt2.11□□□□□ -2.07
PDH1Q12428 SNC2YOR327C 348 nt2.11□□□□□ -2.07
PDH1Q12428 DAD3YBR233W-A 285 nt2.11□□□□□ -2.07
PDH1Q12428 SOK2YMR016C 2358 nt2.11□□□□□ -2.07
PDH1Q12428 SSD1YDR293C 3753 nt2.1□□□□□ -2.07
PDH1Q12428 VPS35YJL154C 2835 nt2.1□□□□□ -2.07
PDH1Q12428 KOG1YHR186C 4674 nt2.1□□□□□ -2.07
PDH1Q12428 YGL239CYGL239C 315 nt2.1□□□□□ -2.07
PDH1Q12428 YLR053CYLR053C 327 nt2.1□□□□□ -2.07
PDH1Q12428 RPL26AYLR344W 384 nt2.1□□□□□ -2.07
PDH1Q12428 ISF1YMR081C 1017 nt2.1□□□□□ -2.07
PDH1Q12428 ATG9YDL149W 2994 nt2.09□□□□□ -2.07
PDH1Q12428 YDR286CYDR286C 345 nt2.09□□□□□ -2.07
PDH1Q12428 ABM1YJR108W 372 nt2.09□□□□□ -2.07
PDH1Q12428 YAL059C-AYAL059C-A 423 nt2.09□□□□□ -2.07
PDH1Q12428 IRC23YOR044W 474 nt2.09□□□□□ -2.07
PDH1Q12428 YOR199WYOR199W 330 nt2.09□□□□□ -2.07
PDH1Q12428 NUP120YKL057C 3114 nt2.08□□□□□ -2.08
PDH1Q12428 DNF1YER166W 4716 nt2.08□□□□□ -2.08
PDH1Q12428 YIL066W-AYIL066W-A 444 nt2.08□□□□□ -2.08
PDH1Q12428 YJL052C-AYJL052C-A 120 nt2.08□□□□□ -2.08
PDH1Q12428 YKL118WYKL118W 312 nt2.08□□□□□ -2.08
PDH1Q12428 PGA1YNL158W 597 nt2.08□□□□□ -2.08
PDH1Q12428 SPO22YIL073C 2928 nt2.08□□□□□ -2.08
PDH1Q12428 CAT2YML042W 2013 nt2.08□□□□□ -2.08
PDH1Q12428 YOL098CYOL098C 3114 nt2.08□□□□□ -2.08
PDH1Q12428 USO1YDL058W 5373 nt2.08□□□□□ -2.08
PDH1Q12428 AIM9YER080W 1884 nt2.07□□□□□ -2.08
PDH1Q12428 HOP2YGL033W 657 nt2.07□□□□□ -2.08
PDH1Q12428 tW(UCA)QtW(UCA)Q 74 nt2.07□□□□□ -2.08
PDH1Q12428 YKL083WYKL083W 615 nt2.07□□□□□ -2.08
PDH1Q12428 YBL073WYBL073W 312 nt2.07□□□□□ -2.08
PDH1Q12428 YDR341CYDR341C 1824 nt2.07□□□□□ -2.08
PDH1Q12428 HER1YOR227W 3741 nt2.07□□□□□ -2.08
PDH1Q12428 DOT6YER088C 2013 nt2.07□□□□□ -2.08
PDH1Q12428 PDR8YLR266C 2106 nt2.06□□□□□ -2.08
PDH1Q12428 RPL37BYDR500C 267 nt2.06□□□□□ -2.08
PDH1Q12428 YJL020W-AYJL020W-A 258 nt2.06□□□□□ -2.08
PDH1Q12428 TIM18YOR297C 579 nt2.06□□□□□ -2.08
PDH1Q12428 SYH1YPL105C 2550 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms