Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 ALG5YPL227C 1005 nt-0.56□□□□□ -2.5
VPS13Q07878 HOT13YKL084W 351 nt-0.56□□□□□ -2.5
VPS13Q07878 YDL196WYDL196W 330 nt-0.57□□□□□ -2.5
VPS13Q07878 YEL009C-AYEL009C-A 408 nt-0.57□□□□□ -2.5
VPS13Q07878 ATG10YLL042C 504 nt-0.57□□□□□ -2.5
VPS13Q07878 YEL073CYEL073C 324 nt-0.57□□□□□ -2.5
VPS13Q07878 COBQ0105 1158 nt-0.57□□□□□ -2.5
VPS13Q07878 YPR170CYPR170C 336 nt-0.57□□□□□ -2.5
VPS13Q07878 NTF2YER009W 378 nt-0.58□□□□□ -2.5
VPS13Q07878 YNL184CYNL184C 327 nt-0.59□□□□□ -2.5
VPS13Q07878 OSH6YKR003W 1347 nt-0.59□□□□□ -2.5
VPS13Q07878 APC5YOR249C 2058 nt-0.59□□□□□ -2.5
VPS13Q07878 PRP42YDR235W 1635 nt-0.6□□□□□ -2.5
VPS13Q07878 MXR1YER042W 555 nt-0.6□□□□□ -2.5
VPS13Q07878 YLR031WYLR031W 561 nt-0.6□□□□□ -2.5
VPS13Q07878 RPS7BYNL096C 573 nt-0.6□□□□□ -2.5
VPS13Q07878 SMT3YDR510W 306 nt-0.6□□□□□ -2.51
VPS13Q07878 YDR034C-CYDR034C-C 1317 nt-0.6□□□□□ -2.51
VPS13Q07878 YIL134C-AYIL134C-A 204 nt-0.61□□□□□ -2.51
VPS13Q07878 YMR31YFR049W 372 nt-0.62□□□□□ -2.51
VPS13Q07878 IRC19YLL033W 693 nt-0.62□□□□□ -2.51
VPS13Q07878 TOA1YOR194C 861 nt-0.62□□□□□ -2.51
VPS13Q07878 SLI15YBR156C 2097 nt-0.62□□□□□ -2.51
VPS13Q07878 snR63snR63 255 nt-0.62□□□□□ -2.51
VPS13Q07878 snR8snR8 190 nt-0.62□□□□□ -2.51
VPS13Q07878 RCN1YKL159C 636 nt-0.63□□□□□ -2.51
VPS13Q07878 PEP3YLR148W 2757 nt-0.63□□□□□ -2.51
VPS13Q07878 EST1YLR233C 2100 nt-0.63□□□□□ -2.51
VPS13Q07878 HOP2YGL033W 657 nt-0.63□□□□□ -2.51
VPS13Q07878 YFL063WYFL063W 456 nt-0.64□□□□□ -2.51
VPS13Q07878 YGR042WYGR042W 816 nt-0.64□□□□□ -2.51
VPS13Q07878 BMT5YIL096C 1011 nt-0.64□□□□□ -2.51
VPS13Q07878 SRB4YER022W 2064 nt-0.64□□□□□ -2.51
VPS13Q07878 GDS1YOR355W 1569 nt-0.65□□□□□ -2.51
VPS13Q07878 SLX4YLR135W 2247 nt-0.65□□□□□ -2.51
VPS13Q07878 CDC33YOL139C 642 nt-0.65□□□□□ -2.51
VPS13Q07878 YOR263CYOR263C 408 nt-0.65□□□□□ -2.51
VPS13Q07878 MET32YDR253C 576 nt-0.65□□□□□ -2.51
VPS13Q07878 RPS27AYKL156W 249 nt-0.65□□□□□ -2.51
VPS13Q07878 IRC14YOR135C 342 nt-0.66□□□□□ -2.52
VPS13Q07878 IMP3YHR148W 552 nt-0.67□□□□□ -2.52
VPS13Q07878 SPO77YLR341W 1434 nt-0.67□□□□□ -2.52
VPS13Q07878 YJL077W-AYJL077W-A 87 nt-0.67□□□□□ -2.52
VPS13Q07878 SEC8YPR055W 3198 nt-0.67□□□□□ -2.52
VPS13Q07878 CUL3YGR003W 2235 nt-0.68□□□□□ -2.52
VPS13Q07878 PCL9YDL179W 915 nt-0.68□□□□□ -2.52
VPS13Q07878 YDR003W-AYDR003W-A 123 nt-0.68□□□□□ -2.52
VPS13Q07878 PRM8YGL053W 714 nt-0.68□□□□□ -2.52
VPS13Q07878 HYM1YKL189W 1200 nt-0.68□□□□□ -2.52
VPS13Q07878 YLR282CYLR282C 342 nt-0.68□□□□□ -2.52
VPS13Q07878 Q0142Q0142 177 nt-0.69□□□□□ -2.52
VPS13Q07878 YBR196C-BYBR196C-B 105 nt-0.69□□□□□ -2.52
VPS13Q07878 SFM1YOR021C 642 nt-0.7□□□□□ -2.52
VPS13Q07878 CMC2YBL059C-A 330 nt-0.7□□□□□ -2.52
VPS13Q07878 VPS52YDR484W 1926 nt-0.71□□□□□ -2.52
VPS13Q07878 PET130YJL023C 1044 nt-0.71□□□□□ -2.52
VPS13Q07878 YOR015WYOR015W 360 nt-0.71□□□□□ -2.52
VPS13Q07878 SLD3YGL113W 2007 nt-0.71□□□□□ -2.52
VPS13Q07878 COS12YGL263W 1143 nt-0.71□□□□□ -2.52
VPS13Q07878 YIR036W-AYIR036W-A 402 nt-0.71□□□□□ -2.52
VPS13Q07878 YBR134WYBR134W 402 nt-0.71□□□□□ -2.52
VPS13Q07878 BIT61YJL058C 1632 nt-0.72□□□□□ -2.52
VPS13Q07878 YDR210W-AYDR210W-A 1317 nt-0.72□□□□□ -2.52
VPS13Q07878 YFL002W-BYFL002W-B 1317 nt-0.72□□□□□ -2.52
VPS13Q07878 YGR161W-AYGR161W-A 1317 nt-0.72□□□□□ -2.52
VPS13Q07878 YLR410W-AYLR410W-A 1317 nt-0.72□□□□□ -2.52
VPS13Q07878 YCL020WYCL020W 1317 nt-0.72□□□□□ -2.52
VPS13Q07878 RPS26AYGL189C 360 nt-0.72□□□□□ -2.53
VPS13Q07878 TFB6YOR352W 1032 nt-0.72□□□□□ -2.53
VPS13Q07878 YHR063W-AYHR063W-A 336 nt-0.73□□□□□ -2.53
VPS13Q07878 STO1YMR125W 2586 nt-0.73□□□□□ -2.53
VPS13Q07878 snR84snR84 550 nt-0.73□□□□□ -2.53
VPS13Q07878 OMA1YKR087C 1038 nt-0.73□□□□□ -2.53
VPS13Q07878 UAF30YOR295W 687 nt-0.73□□□□□ -2.53
VPS13Q07878 YOR376WYOR376W 369 nt-0.74□□□□□ -2.53
VPS13Q07878 RPS29BYDL061C 171 nt-0.74□□□□□ -2.53
VPS13Q07878 MGA1YGR249W 1371 nt-0.75□□□□□ -2.53
VPS13Q07878 YBL068W-AYBL068W-A 237 nt-0.75□□□□□ -2.53
VPS13Q07878 PSO2YMR137C 1986 nt-0.75□□□□□ -2.53
VPS13Q07878 YLR402WYLR402W 192 nt-0.75□□□□□ -2.53
VPS13Q07878 SST2YLR452C 2097 nt-0.75□□□□□ -2.53
VPS13Q07878 YGL193CYGL193C 312 nt-0.75□□□□□ -2.53
VPS13Q07878 CKA1YIL035C 1119 nt-0.75□□□□□ -2.53
VPS13Q07878 CPR3YML078W 549 nt-0.76□□□□□ -2.53
VPS13Q07878 VPS28YPL065W 729 nt-0.76□□□□□ -2.53
VPS13Q07878 EMC5YIL027C 426 nt-0.78□□□□□ -2.53
VPS13Q07878 FMP23YBR047W 528 nt-0.78□□□□□ -2.53
VPS13Q07878 ORC3YLL004W 1851 nt-0.79□□□□□ -2.54
VPS13Q07878 MMS21YEL019C 804 nt-0.79□□□□□ -2.54
VPS13Q07878 RRG1YDR065W 1098 nt-0.8□□□□□ -2.54
VPS13Q07878 YNL150WYNL150W 408 nt-0.8□□□□□ -2.54
VPS13Q07878 CDC10YCR002C 969 nt-0.8□□□□□ -2.54
VPS13Q07878 snR128snR128 126 nt-0.8□□□□□ -2.54
VPS13Q07878 CCL1YPR025C 1182 nt-0.8□□□□□ -2.54
VPS13Q07878 YGR045CYGR045C 363 nt-0.81□□□□□ -2.54
VPS13Q07878 SNC1YAL030W 354 nt-0.81□□□□□ -2.54
VPS13Q07878 YAL067W-AYAL067W-A 228 nt-0.81□□□□□ -2.54
VPS13Q07878 GEP7YGL057C 864 nt-0.82□□□□□ -2.54
VPS13Q07878 VPS25YJR102C 609 nt-0.82□□□□□ -2.54
VPS13Q07878 YNL226WYNL226W 411 nt-0.82□□□□□ -2.54
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms