Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 NAB3YPL190C 2409 nt3.64□□□□□ -1.83
LCB5Q06147 TIM11YDR322C-A 291 nt3.64□□□□□ -1.83
LCB5Q06147 MPT5YGL178W 2580 nt3.63□□□□□ -1.83
LCB5Q06147 ZDS2YML109W 2829 nt3.63□□□□□ -1.83
LCB5Q06147 RPL25YOL127W 429 nt3.63□□□□□ -1.83
LCB5Q06147 RPS23BYPR132W 438 nt3.63□□□□□ -1.83
LCB5Q06147 YBR174CYBR174C 315 nt3.63□□□□□ -1.83
LCB5Q06147 VTC4YJL012C 2166 nt3.63□□□□□ -1.83
LCB5Q06147 YOR019WYOR019W 2193 nt3.63□□□□□ -1.83
LCB5Q06147 RIX1YHR197W 2292 nt3.63□□□□□ -1.83
LCB5Q06147 URB2YJR041C 3525 nt3.62□□□□□ -1.83
LCB5Q06147 YAL064W-BYAL064W-B 381 nt3.62□□□□□ -1.83
LCB5Q06147 RPN2YIL075C 2838 nt3.62□□□□□ -1.83
LCB5Q06147 RRP5YMR229C 5190 nt3.62□□□□□ -1.83
LCB5Q06147 SKT5YBL061C 2091 nt3.62□□□□□ -1.83
LCB5Q06147 LEU3YLR451W 2661 nt3.62□□□□□ -1.83
LCB5Q06147 MSH2YOL090W 2895 nt3.61□□□□□ -1.83
LCB5Q06147 KHA1YJL094C 2622 nt3.61□□□□□ -1.83
LCB5Q06147 BNI4YNL233W 2679 nt3.61□□□□□ -1.83
LCB5Q06147 RAD5YLR032W 3510 nt3.61□□□□□ -1.83
LCB5Q06147 YNL144CYNL144C 2223 nt3.6□□□□□ -1.83
LCB5Q06147 RSF2YJR127C 4143 nt3.6□□□□□ -1.83
LCB5Q06147 snR81snR81 201 nt3.6□□□□□ -1.83
LCB5Q06147 LSO2YGR169C-A 279 nt3.6□□□□□ -1.83
LCB5Q06147 RPS8AYBL072C 603 nt3.6□□□□□ -1.83
LCB5Q06147 YPL044CYPL044C 549 nt3.6□□□□□ -1.83
LCB5Q06147 HAL9YOL089C 3093 nt3.6□□□□□ -1.83
LCB5Q06147 CDC20YGL116W 1833 nt3.6□□□□□ -1.83
LCB5Q06147 ELG1YOR144C 2376 nt3.6□□□□□ -1.83
LCB5Q06147 NOC3YLR002C 1992 nt3.6□□□□□ -1.83
LCB5Q06147 ALK2YBL009W 2031 nt3.6□□□□□ -1.83
LCB5Q06147 SET1YHR119W 3243 nt3.59□□□□□ -1.83
LCB5Q06147 RPS21AYKR057W 264 nt3.59□□□□□ -1.83
LCB5Q06147 ZIP2YGL249W 2115 nt3.59□□□□□ -1.84
LCB5Q06147 DOT6YER088C 2013 nt3.58□□□□□ -1.84
LCB5Q06147 YER039C-AYER039C-A 219 nt3.58□□□□□ -1.84
LCB5Q06147 YHL006W-AYHL006W-A 354 nt3.58□□□□□ -1.84
LCB5Q06147 RRN6YBL014C 2685 nt3.58□□□□□ -1.84
LCB5Q06147 KAR3YPR141C 2190 nt3.58□□□□□ -1.84
LCB5Q06147 YDL196WYDL196W 330 nt3.57□□□□□ -1.84
LCB5Q06147 YGR050CYGR050C 357 nt3.57□□□□□ -1.84
LCB5Q06147 YBL065WYBL065W 345 nt3.57□□□□□ -1.84
LCB5Q06147 NCA2YPR155C 1851 nt3.57□□□□□ -1.84
LCB5Q06147 MDN1YLR106C 14733 nt3.57□□□□□ -1.84
LCB5Q06147 VPS3YDR495C 3036 nt3.57□□□□□ -1.84
LCB5Q06147 MYO5YMR109W 3660 nt3.56□□□□□ -1.84
LCB5Q06147 PTC5YOR090C 1719 nt3.56□□□□□ -1.84
LCB5Q06147 MDV1YJL112W 2145 nt3.56□□□□□ -1.84
LCB5Q06147 AUS1YOR011W 4185 nt3.56□□□□□ -1.84
LCB5Q06147 NMA111YNL123W 2994 nt3.55□□□□□ -1.84
LCB5Q06147 RCO1YMR075W 2055 nt3.55□□□□□ -1.84
LCB5Q06147 RAD2YGR258C 3096 nt3.55□□□□□ -1.84
LCB5Q06147 ARO1YDR127W 4767 nt3.55□□□□□ -1.84
LCB5Q06147 APL5YPL195W 2799 nt3.55□□□□□ -1.84
LCB5Q06147 CTF4YPR135W 2784 nt3.55□□□□□ -1.84
LCB5Q06147 YNL266WYNL266W 420 nt3.54□□□□□ -1.84
LCB5Q06147 SEC63YOR254C 1992 nt3.54□□□□□ -1.84
LCB5Q06147 GCN1YGL195W 8019 nt3.54□□□□□ -1.84
LCB5Q06147 FYV10YIL097W 1551 nt3.53□□□□□ -1.84
LCB5Q06147 COS111YBR203W 2775 nt3.53□□□□□ -1.84
LCB5Q06147 INP2YMR163C 2118 nt3.53□□□□□ -1.84
LCB5Q06147 SLD3YGL113W 2007 nt3.53□□□□□ -1.84
LCB5Q06147 EFR3YMR212C 2349 nt3.52□□□□□ -1.85
LCB5Q06147 YDR193WYDR193W 399 nt3.52□□□□□ -1.85
LCB5Q06147 HYP2YEL034W 474 nt3.52□□□□□ -1.85
LCB5Q06147 PEP3YLR148W 2757 nt3.52□□□□□ -1.85
LCB5Q06147 SIZ1YDR409W 2715 nt3.52□□□□□ -1.85
LCB5Q06147 POL2YNL262W 6669 nt3.52□□□□□ -1.85
LCB5Q06147 AI2Q0055 2565 nt3.52□□□□□ -1.85
LCB5Q06147 RPL31AYDL075W 342 nt3.51□□□□□ -1.85
LCB5Q06147 CSR2YPR030W 3366 nt3.5□□□□□ -1.85
LCB5Q06147 NPR1YNL183C 2373 nt3.5□□□□□ -1.85
LCB5Q06147 RPS17BYDR447C 411 nt3.5□□□□□ -1.85
LCB5Q06147 PAU10YDR542W 363 nt3.5□□□□□ -1.85
LCB5Q06147 PAU11YGL261C 363 nt3.5□□□□□ -1.85
LCB5Q06147 YLL019W-AYLL019W-A 93 nt3.5□□□□□ -1.85
LCB5Q06147 PAU4YLR461W 363 nt3.5□□□□□ -1.85
LCB5Q06147 TIM12YBR091C 330 nt3.5□□□□□ -1.85
LCB5Q06147 PUF4YGL014W 2667 nt3.5□□□□□ -1.85
LCB5Q06147 AKR1YDR264C 2295 nt3.5□□□□□ -1.85
LCB5Q06147 FIG4YNL325C 2640 nt3.5□□□□□ -1.85
LCB5Q06147 YDR034C-DYDR034C-D 5313 nt3.49□□□□□ -1.85
LCB5Q06147 SIP3YNL257C 3690 nt3.49□□□□□ -1.85
LCB5Q06147 RPN1YHR027C 2982 nt3.49□□□□□ -1.85
LCB5Q06147 GIN4YDR507C 3429 nt3.48□□□□□ -1.85
LCB5Q06147 YMR317WYMR317W 3423 nt3.48□□□□□ -1.85
LCB5Q06147 tC(GCA)BtC(GCA)B 72 nt3.47□□□□□ -1.85
LCB5Q06147 tC(GCA)GtC(GCA)G 72 nt3.47□□□□□ -1.85
LCB5Q06147 tC(GCA)P1tC(GCA)P1 72 nt3.47□□□□□ -1.85
LCB5Q06147 tC(GCA)P2tC(GCA)P2 72 nt3.47□□□□□ -1.85
LCB5Q06147 YAL067W-AYAL067W-A 228 nt3.46□□□□□ -1.86
LCB5Q06147 RSC1YGR056W 2787 nt3.46□□□□□ -1.86
LCB5Q06147 ROG1YGL144C 2058 nt3.46□□□□□ -1.86
LCB5Q06147 DIA2YOR080W 2199 nt3.46□□□□□ -1.86
LCB5Q06147 STU2YLR045C 2667 nt3.46□□□□□ -1.86
LCB5Q06147 UTP8YGR128C 2142 nt3.45□□□□□ -1.86
LCB5Q06147 PHD1YKL043W 1101 nt3.45□□□□□ -1.86
LCB5Q06147 SPO75YLL005C 2607 nt3.45□□□□□ -1.86
LCB5Q06147 FAR1YJL157C 2493 nt3.44□□□□□ -1.86
LCB5Q06147 YER078W-AYER078W-A 165 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms