Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.42■□□□□ 0.86
AP1S1P61966 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 KRT18P6-201ENST00000555540 1265 ntBASIC20.42■□□□□ 0.86
AP1S1P61966 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.42■□□□□ 0.86
AP1S1P61966 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.42■□□□□ 0.86
AP1S1P61966 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
AP1S1P61966 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.41■□□□□ 0.86
AP1S1P61966 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP1S1P61966 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP1S1P61966 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.41■□□□□ 0.86
AP1S1P61966 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
AP1S1P61966 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
AP1S1P61966 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.41■□□□□ 0.86
AP1S1P61966 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.41■□□□□ 0.86
AP1S1P61966 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP1S1P61966 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.4■□□□□ 0.86
AP1S1P61966 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
AP1S1P61966 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.4■□□□□ 0.86
AP1S1P61966 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.4■□□□□ 0.86
AP1S1P61966 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.4■□□□□ 0.86
AP1S1P61966 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.4■□□□□ 0.86
AP1S1P61966 AC060766.5-201ENST00000590539 871 ntBASIC20.4■□□□□ 0.86
AP1S1P61966 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
AP1S1P61966 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S1P61966 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
AP1S1P61966 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP1S1P61966 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AP1S1P61966 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP1S1P61966 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
AP1S1P61966 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.39■□□□□ 0.86
AP1S1P61966 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP1S1P61966 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP1S1P61966 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.39■□□□□ 0.85
AP1S1P61966 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.39■□□□□ 0.85
AP1S1P61966 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.39■□□□□ 0.85
AP1S1P61966 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.39■□□□□ 0.85
AP1S1P61966 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.39■□□□□ 0.85
AP1S1P61966 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.39■□□□□ 0.85
AP1S1P61966 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP1S1P61966 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
AP1S1P61966 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP1S1P61966 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP1S1P61966 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.39■□□□□ 0.85
AP1S1P61966 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
AP1S1P61966 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.39■□□□□ 0.85
AP1S1P61966 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.38■□□□□ 0.85
AP1S1P61966 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
AP1S1P61966 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.38■□□□□ 0.85
AP1S1P61966 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.38■□□□□ 0.85
AP1S1P61966 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.38■□□□□ 0.85
AP1S1P61966 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.38■□□□□ 0.85
AP1S1P61966 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AP1S1P61966 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AP1S1P61966 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S1P61966 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
AP1S1P61966 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
AP1S1P61966 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.37■□□□□ 0.85
AP1S1P61966 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 AC023632.3-201ENST00000521633 145 ntBASIC20.37■□□□□ 0.85
AP1S1P61966 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.37■□□□□ 0.85
AP1S1P61966 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 AC092368.3-202ENST00000574180 1591 ntBASIC20.37■□□□□ 0.85
AP1S1P61966 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms