Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.18■□□□□ 0.66
WNT3P56703 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.18■□□□□ 0.66
WNT3P56703 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.18■□□□□ 0.66
WNT3P56703 CDCA4P2-201ENST00000441182 718 ntBASIC19.18■□□□□ 0.66
WNT3P56703 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 AC011767.1-201ENST00000617410 1153 ntBASIC19.18■□□□□ 0.66
WNT3P56703 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.18■□□□□ 0.66
WNT3P56703 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
WNT3P56703 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
WNT3P56703 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.18■□□□□ 0.66
WNT3P56703 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
WNT3P56703 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.17■□□□□ 0.66
WNT3P56703 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.17■□□□□ 0.66
WNT3P56703 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.17■□□□□ 0.66
WNT3P56703 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.17■□□□□ 0.66
WNT3P56703 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 BID-214ENST00000617586 542 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.17■□□□□ 0.66
WNT3P56703 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
WNT3P56703 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 DPP3P2-201ENST00000416030 1696 ntBASIC19.17■□□□□ 0.66
WNT3P56703 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
WNT3P56703 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
WNT3P56703 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
WNT3P56703 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.16■□□□□ 0.66
WNT3P56703 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.16■□□□□ 0.66
WNT3P56703 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
WNT3P56703 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.16■□□□□ 0.66
WNT3P56703 AC125437.2-201ENST00000625180 2167 ntBASIC19.16■□□□□ 0.66
WNT3P56703 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.16■□□□□ 0.66
WNT3P56703 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
WNT3P56703 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
WNT3P56703 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
WNT3P56703 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
WNT3P56703 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
WNT3P56703 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
WNT3P56703 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.15■□□□□ 0.66
WNT3P56703 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.15■□□□□ 0.66
WNT3P56703 ID1-201ENST00000376105 1233 ntBASIC19.15■□□□□ 0.66
WNT3P56703 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.15■□□□□ 0.66
WNT3P56703 CDV3P1-201ENST00000471403 739 ntBASIC19.15■□□□□ 0.66
WNT3P56703 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 RAP2CP1-201ENST00000605103 478 ntBASIC19.15■□□□□ 0.66
WNT3P56703 FAM21FP-204ENST00000608637 956 ntBASIC19.15■□□□□ 0.66
WNT3P56703 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.15■□□□□ 0.66
WNT3P56703 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.15■□□□□ 0.66
WNT3P56703 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.15■□□□□ 0.66
WNT3P56703 AC007952.6-201ENST00000573168 2673 ntBASIC19.15■□□□□ 0.66
WNT3P56703 AC003957.1-201ENST00000625108 2673 ntBASIC19.15■□□□□ 0.66
WNT3P56703 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
WNT3P56703 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
WNT3P56703 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.14■□□□□ 0.66
WNT3P56703 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
WNT3P56703 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3P56703 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.14■□□□□ 0.65
WNT3P56703 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.14■□□□□ 0.65
WNT3P56703 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
WNT3P56703 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3P56703 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3P56703 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms