Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 snR55snR55 98 nt2.51□□□□□ -2.01
ATG4P53867 YML037CYML037C 1023 nt2.51□□□□□ -2.01
ATG4P53867 VPS35YJL154C 2835 nt2.5□□□□□ -2.01
ATG4P53867 GUP1YGL084C 1683 nt2.5□□□□□ -2.01
ATG4P53867 INP52YNL106C 3552 nt2.5□□□□□ -2.01
ATG4P53867 DFG16YOR030W 1860 nt2.5□□□□□ -2.01
ATG4P53867 CAF120YNL278W 3183 nt2.5□□□□□ -2.01
ATG4P53867 RPL38YLR325C 237 nt2.5□□□□□ -2.01
ATG4P53867 BFA1YJR053W 1725 nt2.5□□□□□ -2.01
ATG4P53867 BPT1YLL015W 4680 nt2.5□□□□□ -2.01
ATG4P53867 FLO11YIR019C 4104 nt2.49□□□□□ -2.01
ATG4P53867 YPR089WYPR089W 2667 nt2.49□□□□□ -2.01
ATG4P53867 PMR1YGL167C 2853 nt2.49□□□□□ -2.01
ATG4P53867 KSP1YHR082C 3090 nt2.49□□□□□ -2.01
ATG4P53867 YDR209CYDR209C 414 nt2.49□□□□□ -2.01
ATG4P53867 PRE4YFR050C 801 nt2.49□□□□□ -2.01
ATG4P53867 FPR1YNL135C 345 nt2.49□□□□□ -2.01
ATG4P53867 YOR302WYOR302W 78 nt2.49□□□□□ -2.01
ATG4P53867 TOF2YKR010C 2316 nt2.49□□□□□ -2.01
ATG4P53867 BUB1YGR188C 3066 nt2.49□□□□□ -2.01
ATG4P53867 YPL216WYPL216W 3309 nt2.48□□□□□ -2.01
ATG4P53867 HRD3YLR207W 2502 nt2.48□□□□□ -2.01
ATG4P53867 SIN3YOL004W 4611 nt2.48□□□□□ -2.01
ATG4P53867 SAP1YER047C 2694 nt2.48□□□□□ -2.01
ATG4P53867 MVP1YMR004W 1536 nt2.48□□□□□ -2.01
ATG4P53867 ALK2YBL009W 2031 nt2.48□□□□□ -2.01
ATG4P53867 YLR278CYLR278C 4026 nt2.48□□□□□ -2.01
ATG4P53867 UPS1YLR193C 528 nt2.48□□□□□ -2.01
ATG4P53867 YMR172C-AYMR172C-A 384 nt2.48□□□□□ -2.01
ATG4P53867 CYB5YNL111C 363 nt2.48□□□□□ -2.01
ATG4P53867 SNC2YOR327C 348 nt2.48□□□□□ -2.01
ATG4P53867 SCW11YGL028C 1629 nt2.48□□□□□ -2.01
ATG4P53867 UBP14YBR058C 2346 nt2.48□□□□□ -2.01
ATG4P53867 TMN3YER113C 2121 nt2.48□□□□□ -2.01
ATG4P53867 UTP14YML093W 2700 nt2.48□□□□□ -2.01
ATG4P53867 YGR250CYGR250C 2346 nt2.47□□□□□ -2.01
ATG4P53867 PRP6YBR055C 2700 nt2.47□□□□□ -2.01
ATG4P53867 snR70snR70 164 nt2.47□□□□□ -2.01
ATG4P53867 PAU2YEL049W 363 nt2.47□□□□□ -2.01
ATG4P53867 GPG1YGL121C 381 nt2.47□□□□□ -2.01
ATG4P53867 SMD1YGR074W 441 nt2.47□□□□□ -2.01
ATG4P53867 YAL042C-AYAL042C-A 378 nt2.47□□□□□ -2.01
ATG4P53867 PCC1YKR095W-A 267 nt2.47□□□□□ -2.01
ATG4P53867 YBL008W-AYBL008W-A 240 nt2.47□□□□□ -2.01
ATG4P53867 YML007C-AYML007C-A 111 nt2.47□□□□□ -2.01
ATG4P53867 RPL33AYPL143W 324 nt2.47□□□□□ -2.01
ATG4P53867 MDM20YOL076W 2391 nt2.47□□□□□ -2.01
ATG4P53867 NAB6YML117W 3405 nt2.47□□□□□ -2.01
ATG4P53867 ECM29YHL030W 5607 nt2.47□□□□□ -2.01
ATG4P53867 GCV2YMR189W 3105 nt2.46□□□□□ -2.01
ATG4P53867 FIR1YER032W 2631 nt2.46□□□□□ -2.02
ATG4P53867 YDR426CYDR426C 378 nt2.46□□□□□ -2.02
ATG4P53867 NUT2YPR168W 474 nt2.46□□□□□ -2.02
ATG4P53867 GEA1YJR031C 4227 nt2.46□□□□□ -2.02
ATG4P53867 DNA2YHR164C 4569 nt2.46□□□□□ -2.02
ATG4P53867 YDL185C-AYDL185C-A 228 nt2.45□□□□□ -2.02
ATG4P53867 NOP10YHR072W-A 177 nt2.45□□□□□ -2.02
ATG4P53867 YMR141W-AYMR141W-A 225 nt2.45□□□□□ -2.02
ATG4P53867 ATG13YPR185W 2217 nt2.44□□□□□ -2.02
ATG4P53867 YGL052WYGL052W 306 nt2.44□□□□□ -2.02
ATG4P53867 tW(CCA)G1tW(CCA)G1 72 nt2.44□□□□□ -2.02
ATG4P53867 tW(CCA)G2tW(CCA)G2 72 nt2.44□□□□□ -2.02
ATG4P53867 tW(CCA)JtW(CCA)J 72 nt2.44□□□□□ -2.02
ATG4P53867 tW(CCA)KtW(CCA)K 72 nt2.44□□□□□ -2.02
ATG4P53867 tW(CCA)MtW(CCA)M 72 nt2.44□□□□□ -2.02
ATG4P53867 tW(CCA)PtW(CCA)P 72 nt2.44□□□□□ -2.02
ATG4P53867 YLR255CYLR255C 354 nt2.44□□□□□ -2.02
ATG4P53867 YMR230W-AYMR230W-A 189 nt2.44□□□□□ -2.02
ATG4P53867 YNL338WYNL338W 159 nt2.44□□□□□ -2.02
ATG4P53867 YOR333CYOR333C 417 nt2.44□□□□□ -2.02
ATG4P53867 VMA9YCL005W-A 222 nt2.44□□□□□ -2.02
ATG4P53867 PEX8YGR077C 1770 nt2.44□□□□□ -2.02
ATG4P53867 YDR239CYDR239C 2364 nt2.43□□□□□ -2.02
ATG4P53867 FMP16YDR070C 282 nt2.43□□□□□ -2.02
ATG4P53867 YOR015WYOR015W 360 nt2.43□□□□□ -2.02
ATG4P53867 YBR224WYBR224W 516 nt2.43□□□□□ -2.02
ATG4P53867 PSD2YGR170W 3417 nt2.42□□□□□ -2.02
ATG4P53867 SSN2YDR443C 4263 nt2.42□□□□□ -2.02
ATG4P53867 NOP53YPL146C 1368 nt2.42□□□□□ -2.02
ATG4P53867 YMR321CYMR321C 318 nt2.42□□□□□ -2.02
ATG4P53867 YNL028WYNL028W 318 nt2.42□□□□□ -2.02
ATG4P53867 YPL150WYPL150W 2706 nt2.42□□□□□ -2.02
ATG4P53867 TCB2YNL087W 3537 nt2.42□□□□□ -2.02
ATG4P53867 TFC4YGR047C 3078 nt2.41□□□□□ -2.02
ATG4P53867 PNC1YGL037C 651 nt2.41□□□□□ -2.02
ATG4P53867 YLR120W-AYLR120W-A 102 nt2.41□□□□□ -2.02
ATG4P53867 CSE2YNR010W 450 nt2.41□□□□□ -2.02
ATG4P53867 YDR098C-BYDR098C-B 5268 nt2.41□□□□□ -2.02
ATG4P53867 YDR210C-DYDR210C-D 5268 nt2.41□□□□□ -2.02
ATG4P53867 YDR316W-BYDR316W-B 5268 nt2.41□□□□□ -2.02
ATG4P53867 YDR365W-BYDR365W-B 5268 nt2.41□□□□□ -2.02
ATG4P53867 YER138CYER138C 5268 nt2.41□□□□□ -2.02
ATG4P53867 YER160CYER160C 5268 nt2.41□□□□□ -2.02
ATG4P53867 YGR038C-BYGR038C-B 5268 nt2.41□□□□□ -2.02
ATG4P53867 YGR161C-DYGR161C-D 5268 nt2.41□□□□□ -2.02
ATG4P53867 YJR027WYJR027W 5268 nt2.41□□□□□ -2.02
ATG4P53867 YLR157C-BYLR157C-B 5268 nt2.41□□□□□ -2.02
ATG4P53867 YML039WYML039W 5268 nt2.41□□□□□ -2.02
ATG4P53867 YML045WYML045W 5268 nt2.41□□□□□ -2.02
ATG4P53867 YMR050CYMR050C 5268 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 97.1 ms