Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 YGL239CYGL239C 315 nt1.92□□□□□ -2.1
CAF40P53829 YHR032W-AYHR032W-A 180 nt1.92□□□□□ -2.1
CAF40P53829 YHR052W-AYHR052W-A 195 nt1.92□□□□□ -2.1
CAF40P53829 YHR054W-AYHR054W-A 195 nt1.92□□□□□ -2.1
CAF40P53829 MSL1YIR009W 336 nt1.92□□□□□ -2.1
CAF40P53829 YOR394C-AYOR394C-A 168 nt1.92□□□□□ -2.1
CAF40P53829 YPR099CYPR099C 357 nt1.92□□□□□ -2.1
CAF40P53829 FKS1YLR342W 5631 nt1.92□□□□□ -2.1
CAF40P53829 NOT5YPR072W 1683 nt1.91□□□□□ -2.1
CAF40P53829 tW(UCA)QtW(UCA)Q 74 nt1.91□□□□□ -2.1
CAF40P53829 YBR224WYBR224W 516 nt1.91□□□□□ -2.1
CAF40P53829 COS111YBR203W 2775 nt1.91□□□□□ -2.1
CAF40P53829 MSB1YOR188W 3414 nt1.91□□□□□ -2.1
CAF40P53829 SOK2YMR016C 2358 nt1.91□□□□□ -2.1
CAF40P53829 CDC53YDL132W 2448 nt1.9□□□□□ -2.1
CAF40P53829 DOT6YER088C 2013 nt1.9□□□□□ -2.11
CAF40P53829 UFD4YKL010C 4452 nt1.9□□□□□ -2.11
CAF40P53829 YDL118WYDL118W 381 nt1.9□□□□□ -2.11
CAF40P53829 YAL063C-AYAL063C-A 291 nt1.9□□□□□ -2.11
CAF40P53829 YAR053WYAR053W 297 nt1.9□□□□□ -2.11
CAF40P53829 YOL019W-AYOL019W-A 153 nt1.9□□□□□ -2.11
CAF40P53829 YPL182CYPL182C 384 nt1.9□□□□□ -2.11
CAF40P53829 MET18YIL128W 3099 nt1.89□□□□□ -2.11
CAF40P53829 CDC27YBL084C 2277 nt1.89□□□□□ -2.11
CAF40P53829 DNA2YHR164C 4569 nt1.89□□□□□ -2.11
CAF40P53829 USO1YDL058W 5373 nt1.89□□□□□ -2.11
CAF40P53829 YDL152WYDL152W 366 nt1.89□□□□□ -2.11
CAF40P53829 DAD4YDR320C-A 219 nt1.89□□□□□ -2.11
CAF40P53829 RPS24AYER074W 408 nt1.89□□□□□ -2.11
CAF40P53829 HOP2YGL033W 657 nt1.89□□□□□ -2.11
CAF40P53829 HSK3YKL138C-A 210 nt1.89□□□□□ -2.11
CAF40P53829 YAF9YNL107W 681 nt1.89□□□□□ -2.11
CAF40P53829 YBL073WYBL073W 312 nt1.89□□□□□ -2.11
CAF40P53829 PGA1YNL158W 597 nt1.89□□□□□ -2.11
CAF40P53829 DIS3YOL021C 3006 nt1.88□□□□□ -2.11
CAF40P53829 PAN3YKL025C 2040 nt1.88□□□□□ -2.11
CAF40P53829 YLR149CYLR149C 2193 nt1.88□□□□□ -2.11
CAF40P53829 RBK1YCR036W 1002 nt1.88□□□□□ -2.11
CAF40P53829 tW(CCA)G1tW(CCA)G1 72 nt1.88□□□□□ -2.11
CAF40P53829 tW(CCA)G2tW(CCA)G2 72 nt1.88□□□□□ -2.11
CAF40P53829 tW(CCA)JtW(CCA)J 72 nt1.88□□□□□ -2.11
CAF40P53829 tW(CCA)KtW(CCA)K 72 nt1.88□□□□□ -2.11
CAF40P53829 tW(CCA)MtW(CCA)M 72 nt1.88□□□□□ -2.11
CAF40P53829 tW(CCA)PtW(CCA)P 72 nt1.88□□□□□ -2.11
CAF40P53829 YJL020W-AYJL020W-A 258 nt1.88□□□□□ -2.11
CAF40P53829 PHS1YJL097W 654 nt1.88□□□□□ -2.11
CAF40P53829 YJR011CYJR011C 786 nt1.88□□□□□ -2.11
CAF40P53829 RPL32YBL092W 393 nt1.88□□□□□ -2.11
CAF40P53829 TMN3YER113C 2121 nt1.88□□□□□ -2.11
CAF40P53829 GCN2YDR283C 4980 nt1.88□□□□□ -2.11
CAF40P53829 NEO1YIL048W 3456 nt1.87□□□□□ -2.11
CAF40P53829 CHC1YGL206C 4962 nt1.87□□□□□ -2.11
CAF40P53829 VPS41YDR080W 2979 nt1.87□□□□□ -2.11
CAF40P53829 YJL052C-AYJL052C-A 120 nt1.87□□□□□ -2.11
CAF40P53829 RPL40BYKR094C 387 nt1.87□□□□□ -2.11
CAF40P53829 COA4YLR218C 453 nt1.87□□□□□ -2.11
CAF40P53829 IRC23YOR044W 474 nt1.87□□□□□ -2.11
CAF40P53829 TIM18YOR297C 579 nt1.87□□□□□ -2.11
CAF40P53829 YOR333CYOR333C 417 nt1.87□□□□□ -2.11
CAF40P53829 RIC1YLR039C 3171 nt1.87□□□□□ -2.11
CAF40P53829 CRM1YGR218W 3255 nt1.86□□□□□ -2.11
CAF40P53829 IST2YBR086C 2841 nt1.86□□□□□ -2.11
CAF40P53829 TIM13YGR181W 318 nt1.86□□□□□ -2.11
CAF40P53829 YKL083WYKL083W 615 nt1.86□□□□□ -2.11
CAF40P53829 VPH1YOR270C 2523 nt1.85□□□□□ -2.11
CAF40P53829 YDR286CYDR286C 345 nt1.85□□□□□ -2.11
CAF40P53829 MBB1YJL199C 327 nt1.85□□□□□ -2.11
CAF40P53829 YBL083CYBL083C 426 nt1.85□□□□□ -2.11
CAF40P53829 AGC1YPR021C 2709 nt1.85□□□□□ -2.11
CAF40P53829 BRE1YDL074C 2103 nt1.85□□□□□ -2.11
CAF40P53829 PEP3YLR148W 2757 nt1.85□□□□□ -2.11
CAF40P53829 LRE1YCL051W 1752 nt1.85□□□□□ -2.11
CAF40P53829 NUP170YBL079W 4509 nt1.84□□□□□ -2.11
CAF40P53829 RTT107YHR154W 3213 nt1.84□□□□□ -2.11
CAF40P53829 RPA34YJL148W 702 nt1.84□□□□□ -2.11
CAF40P53829 PSY1YKL076C 384 nt1.84□□□□□ -2.11
CAF40P53829 YNL146WYNL146W 303 nt1.84□□□□□ -2.11
CAF40P53829 BIL1YOR304C-A 231 nt1.84□□□□□ -2.11
CAF40P53829 YOR343W-BYOR343W-B 5313 nt1.84□□□□□ -2.12
CAF40P53829 AIM9YER080W 1884 nt1.84□□□□□ -2.12
CAF40P53829 SEF1YBL066C 3447 nt1.84□□□□□ -2.12
CAF40P53829 PDR3YBL005W 2931 nt1.83□□□□□ -2.12
CAF40P53829 ABM1YJR108W 372 nt1.83□□□□□ -2.12
CAF40P53829 YPL038W-AYPL038W-A 192 nt1.83□□□□□ -2.12
CAF40P53829 SET2YJL168C 2202 nt1.83□□□□□ -2.12
CAF40P53829 RTT101YJL047C 2529 nt1.82□□□□□ -2.12
CAF40P53829 SKP2YNL311C 2292 nt1.82□□□□□ -2.12
CAF40P53829 MNE1YOR350C 1992 nt1.82□□□□□ -2.12
CAF40P53829 NHP2YDL208W 471 nt1.82□□□□□ -2.12
CAF40P53829 YDR102CYDR102C 333 nt1.82□□□□□ -2.12
CAF40P53829 tC(GCA)BtC(GCA)B 72 nt1.82□□□□□ -2.12
CAF40P53829 tC(GCA)GtC(GCA)G 72 nt1.82□□□□□ -2.12
CAF40P53829 tC(GCA)P1tC(GCA)P1 72 nt1.82□□□□□ -2.12
CAF40P53829 tC(GCA)P2tC(GCA)P2 72 nt1.82□□□□□ -2.12
CAF40P53829 VPS8YAL002W 3825 nt1.82□□□□□ -2.12
CAF40P53829 YNL277W-AYNL277W-A 189 nt1.82□□□□□ -2.12
CAF40P53829 TRL1YJL087C 2484 nt1.82□□□□□ -2.12
CAF40P53829 HSL1YKL101W 4557 nt1.82□□□□□ -2.12
CAF40P53829 SEC31YDL195W 3822 nt1.82□□□□□ -2.12
CAF40P53829 PAC1YOR269W 1485 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 133.3 ms