Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.59■■□□□ 1.21
CPT1AP50416 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPT1AP50416 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.59■■□□□ 1.21
CPT1AP50416 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPT1AP50416 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.58■■□□□ 1.21
CPT1AP50416 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CPT1AP50416 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPT1AP50416 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPT1AP50416 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CPT1AP50416 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CPT1AP50416 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPT1AP50416 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CPT1AP50416 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.58■■□□□ 1.21
CPT1AP50416 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CPT1AP50416 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.58■■□□□ 1.21
CPT1AP50416 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.58■■□□□ 1.21
CPT1AP50416 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.58■■□□□ 1.21
CPT1AP50416 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPT1AP50416 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPT1AP50416 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.58■■□□□ 1.2
CPT1AP50416 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPT1AP50416 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPT1AP50416 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPT1AP50416 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.57■■□□□ 1.2
CPT1AP50416 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPT1AP50416 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CPT1AP50416 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.57■■□□□ 1.2
CPT1AP50416 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.57■■□□□ 1.2
CPT1AP50416 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.57■■□□□ 1.2
CPT1AP50416 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.57■■□□□ 1.2
CPT1AP50416 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPT1AP50416 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.57■■□□□ 1.2
CPT1AP50416 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.57■■□□□ 1.2
CPT1AP50416 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.57■■□□□ 1.2
CPT1AP50416 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.57■■□□□ 1.2
CPT1AP50416 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPT1AP50416 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
CPT1AP50416 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CPT1AP50416 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPT1AP50416 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CPT1AP50416 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPT1AP50416 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.56■■□□□ 1.2
CPT1AP50416 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPT1AP50416 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPT1AP50416 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPT1AP50416 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.56■■□□□ 1.2
CPT1AP50416 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.56■■□□□ 1.2
CPT1AP50416 KRT16P5-201ENST00000455284 522 ntBASIC22.56■■□□□ 1.2
CPT1AP50416 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.56■■□□□ 1.2
CPT1AP50416 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.56■■□□□ 1.2
CPT1AP50416 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.56■■□□□ 1.2
CPT1AP50416 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPT1AP50416 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CPT1AP50416 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CPT1AP50416 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.55■■□□□ 1.2
CPT1AP50416 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.55■■□□□ 1.2
CPT1AP50416 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CPT1AP50416 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPT1AP50416 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.54■■□□□ 1.2
CPT1AP50416 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 MIR1224-201ENST00000408193 85 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 AC087499.1-201ENST00000418141 1075 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 AL353807.1-201ENST00000427475 662 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 TSPY15P-201ENST00000457163 923 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.54■■□□□ 1.2
CPT1AP50416 AL355075.4-201ENST00000554988 638 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 AL121906.2-201ENST00000621597 723 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 AC133561.5-201ENST00000635547 218 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CPT1AP50416 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CPT1AP50416 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CPT1AP50416 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CPT1AP50416 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.54■■□□□ 1.2
CPT1AP50416 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.54■■□□□ 1.2
CPT1AP50416 NBPF21P-201ENST00000425093 1451 ntBASIC22.54■■□□□ 1.2
CPT1AP50416 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms